Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RNF138Q8WVD3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 NTF6G-201ENST00000591094 616 ntBASIC19.43■□□□□ 0.7
RNF138Q8WVD3 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.43■□□□□ 0.7
RNF138Q8WVD3 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 COX20-201ENST00000366528 568 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.42■□□□□ 0.7
RNF138Q8WVD3 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 AC079834.2-201ENST00000609776 1949 ntBASIC19.41■□□□□ 0.7
RNF138Q8WVD3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 AC138907.5-202ENST00000569484 235 ntBASIC19.41■□□□□ 0.7
RNF138Q8WVD3 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RNF138Q8WVD3 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RNF138Q8WVD3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RNF138Q8WVD3 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RNF138Q8WVD3 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF138Q8WVD3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF138Q8WVD3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RNF138Q8WVD3 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RNF138Q8WVD3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.38■□□□□ 0.69
RNF138Q8WVD3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RNF138Q8WVD3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.38■□□□□ 0.69
RNF138Q8WVD3 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 AC010141.2-201ENST00000452426 721 ntBASIC19.37■□□□□ 0.69
RNF138Q8WVD3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 AC104564.3-201ENST00000582367 638 ntBASIC19.37■□□□□ 0.69
RNF138Q8WVD3 AC104187.1-201ENST00000607510 612 ntBASIC19.37■□□□□ 0.69
RNF138Q8WVD3 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
RNF138Q8WVD3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms