Protein–RNA interactions for Protein: Q8TF17

SH3TC2, SH3 domain and tetratricopeptide repeat-containing protein 2, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC2Q8TF17 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 UNC93B5-201ENST00000530315 699 ntBASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SH3TC2Q8TF17 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 FAM210CP-201ENST00000445714 574 ntBASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 UBE2SP1-201ENST00000450587 669 ntBASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 AP003097.1-201ENST00000530657 1135 ntBASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 ISCU-212ENST00000547005 795 ntTSL 3 BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 AC010331.1-201ENST00000611423 582 ntBASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SH3TC2Q8TF17 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3TC2Q8TF17 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SH3TC2Q8TF17 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
SH3TC2Q8TF17 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SH3TC2Q8TF17 AC073912.3-201ENST00000624414 853 ntBASIC24.29■■□□□ 1.48
SH3TC2Q8TF17 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC24.29■■□□□ 1.48
SH3TC2Q8TF17 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 OR2A1-AS1-201ENST00000462305 773 ntBASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 MAX-217ENST00000557277 728 ntTSL 3 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 AL359736.2-201ENST00000621992 437 ntBASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 THRA-202ENST00000394121 2260 ntTSL 2 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.28■■□□□ 1.48
SH3TC2Q8TF17 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
SH3TC2Q8TF17 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SH3TC2Q8TF17 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
SH3TC2Q8TF17 GXYLT1P3-201ENST00000453058 1193 ntBASIC24.27■■□□□ 1.48
SH3TC2Q8TF17 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC24.27■■□□□ 1.48
SH3TC2Q8TF17 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC24.27■■□□□ 1.48
SH3TC2Q8TF17 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC24.27■■□□□ 1.48
SH3TC2Q8TF17 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SH3TC2Q8TF17 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
SH3TC2Q8TF17 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 AC211429.1-201ENST00000415277 523 ntBASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SH3TC2Q8TF17 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3TC2Q8TF17 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3TC2Q8TF17 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
SH3TC2Q8TF17 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC24.24■■□□□ 1.47
SH3TC2Q8TF17 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms