Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CPEB3Q8NE35 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CPEB3Q8NE35 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 JTB-203ENST00000368589 1216 ntTSL 2 BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.65■□□□□ 0.58
CPEB3Q8NE35 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CPEB3Q8NE35 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.64■□□□□ 0.57
CPEB3Q8NE35 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CPEB3Q8NE35 FBXW4P1-201ENST00000426721 2239 ntBASIC18.64■□□□□ 0.57
CPEB3Q8NE35 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPEB3Q8NE35 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CPEB3Q8NE35 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPEB3Q8NE35 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPEB3Q8NE35 AC010542.4-201ENST00000563151 1910 ntBASIC18.63■□□□□ 0.57
CPEB3Q8NE35 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPEB3Q8NE35 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.63■□□□□ 0.57
CPEB3Q8NE35 AC009237.3-201ENST00000393279 1427 ntBASIC18.63■□□□□ 0.57
CPEB3Q8NE35 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.63■□□□□ 0.57
CPEB3Q8NE35 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.63■□□□□ 0.57
CPEB3Q8NE35 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CPEB3Q8NE35 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 AP006587.3-201ENST00000525742 1516 ntBASIC18.62■□□□□ 0.57
CPEB3Q8NE35 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CPEB3Q8NE35 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 AC005224.4-201ENST00000583262 1652 ntBASIC18.61■□□□□ 0.57
CPEB3Q8NE35 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CPEB3Q8NE35 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms