Protein–RNA interactions for Protein: Q8N587

ZNF561, Zinc finger protein 561, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561Q8N587 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF561Q8N587 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF561Q8N587 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF561Q8N587 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ZNF561Q8N587 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF561Q8N587 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ZNF561Q8N587 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF561Q8N587 MIR939-201ENST00000401314 82 ntBASIC18.1■□□□□ 0.49
ZNF561Q8N587 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC18.1■□□□□ 0.49
ZNF561Q8N587 IGHV3-19-201ENST00000521488 291 ntBASIC18.1■□□□□ 0.49
ZNF561Q8N587 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF561Q8N587 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
ZNF561Q8N587 LSR-203ENST00000360798 1963 ntTSL 2 BASIC18.1■□□□□ 0.49
ZNF561Q8N587 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
ZNF561Q8N587 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
ZNF561Q8N587 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.09■□□□□ 0.49
ZNF561Q8N587 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 OR7E47P-201ENST00000546390 1422 ntBASIC18.09■□□□□ 0.49
ZNF561Q8N587 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF561Q8N587 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF561Q8N587 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.09■□□□□ 0.49
ZNF561Q8N587 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC18.09■□□□□ 0.49
ZNF561Q8N587 AF213884.3-201ENST00000563833 479 ntBASIC18.09■□□□□ 0.49
ZNF561Q8N587 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF561Q8N587 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC18.09■□□□□ 0.49
ZNF561Q8N587 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
ZNF561Q8N587 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF561Q8N587 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.09■□□□□ 0.49
ZNF561Q8N587 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
ZNF561Q8N587 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.08■□□□□ 0.48
ZNF561Q8N587 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
ZNF561Q8N587 AL031432.3-201ENST00000607698 485 ntBASIC18.08■□□□□ 0.48
ZNF561Q8N587 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
ZNF561Q8N587 AL136967.2-201ENST00000623968 743 ntBASIC18.08■□□□□ 0.48
ZNF561Q8N587 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.08■□□□□ 0.48
ZNF561Q8N587 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF561Q8N587 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF561Q8N587 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF561Q8N587 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF561Q8N587 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF561Q8N587 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
ZNF561Q8N587 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ZNF561Q8N587 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF561Q8N587 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF561Q8N587 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF561Q8N587 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF561Q8N587 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF561Q8N587 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF561Q8N587 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF561Q8N587 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.07■□□□□ 0.48
ZNF561Q8N587 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.07■□□□□ 0.48
ZNF561Q8N587 SUDS3P1-201ENST00000505831 966 ntBASIC18.07■□□□□ 0.48
ZNF561Q8N587 AC142381.2-201ENST00000566120 298 ntBASIC18.07■□□□□ 0.48
ZNF561Q8N587 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF561Q8N587 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF561Q8N587 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
ZNF561Q8N587 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.07■□□□□ 0.48
ZNF561Q8N587 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
ZNF561Q8N587 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
ZNF561Q8N587 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
ZNF561Q8N587 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF561Q8N587 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF561Q8N587 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF561Q8N587 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF561Q8N587 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.06■□□□□ 0.48
ZNF561Q8N587 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
ZNF561Q8N587 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.06■□□□□ 0.48
ZNF561Q8N587 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.06■□□□□ 0.48
ZNF561Q8N587 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF561Q8N587 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF561Q8N587 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
ZNF561Q8N587 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
ZNF561Q8N587 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF561Q8N587 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF561Q8N587 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF561Q8N587 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.05■□□□□ 0.48
ZNF561Q8N587 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF561Q8N587 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF561Q8N587 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF561Q8N587 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF561Q8N587 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.05■□□□□ 0.48
ZNF561Q8N587 AC005837.3-201ENST00000612163 286 ntBASIC18.05■□□□□ 0.48
ZNF561Q8N587 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
ZNF561Q8N587 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF561Q8N587 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
ZNF561Q8N587 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF561Q8N587 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.05■□□□□ 0.48
ZNF561Q8N587 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
ZNF561Q8N587 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms