Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SCML4Q8N228 KRT19P1-201ENST00000405746 1186 ntBASIC22.29■■□□□ 1.16
SCML4Q8N228 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SCML4Q8N228 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SCML4Q8N228 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.29■■□□□ 1.16
SCML4Q8N228 C11orf96-202ENST00000528572 1834 ntBASIC22.29■■□□□ 1.16
SCML4Q8N228 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
SCML4Q8N228 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 GOLGA2P6-201ENST00000340929 2049 ntBASIC22.28■■□□□ 1.16
SCML4Q8N228 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.28■■□□□ 1.16
SCML4Q8N228 AC026471.6-201ENST00000622954 1905 ntBASIC22.28■■□□□ 1.16
SCML4Q8N228 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
SCML4Q8N228 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC22.28■■□□□ 1.16
SCML4Q8N228 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC22.28■■□□□ 1.16
SCML4Q8N228 TESC-206ENST00000541210 936 ntTSL 3 BASIC22.28■■□□□ 1.16
SCML4Q8N228 AC138907.5-202ENST00000569484 235 ntBASIC22.28■■□□□ 1.16
SCML4Q8N228 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.28■■□□□ 1.16
SCML4Q8N228 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
SCML4Q8N228 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SCML4Q8N228 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.27■■□□□ 1.16
SCML4Q8N228 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SCML4Q8N228 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCML4Q8N228 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SCML4Q8N228 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCML4Q8N228 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.27■■□□□ 1.16
SCML4Q8N228 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SCML4Q8N228 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC22.27■■□□□ 1.16
SCML4Q8N228 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCML4Q8N228 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SCML4Q8N228 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SCML4Q8N228 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCML4Q8N228 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SCML4Q8N228 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
SCML4Q8N228 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.27■■□□□ 1.15
SCML4Q8N228 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCML4Q8N228 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCML4Q8N228 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.26■■□□□ 1.15
SCML4Q8N228 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SCML4Q8N228 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.26■■□□□ 1.15
SCML4Q8N228 PARL-206ENST00000435888 1098 ntTSL 5 BASIC22.26■■□□□ 1.15
SCML4Q8N228 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC22.26■■□□□ 1.15
SCML4Q8N228 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.26■■□□□ 1.15
SCML4Q8N228 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC22.26■■□□□ 1.15
SCML4Q8N228 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
SCML4Q8N228 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCML4Q8N228 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCML4Q8N228 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SCML4Q8N228 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC22.25■■□□□ 1.15
SCML4Q8N228 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.25■■□□□ 1.15
SCML4Q8N228 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCML4Q8N228 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
SCML4Q8N228 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCML4Q8N228 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
SCML4Q8N228 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCML4Q8N228 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC22.25■■□□□ 1.15
SCML4Q8N228 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.25■■□□□ 1.15
SCML4Q8N228 AC104564.3-201ENST00000582367 638 ntBASIC22.25■■□□□ 1.15
SCML4Q8N228 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC22.25■■□□□ 1.15
SCML4Q8N228 AC104187.1-201ENST00000607510 612 ntBASIC22.25■■□□□ 1.15
SCML4Q8N228 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCML4Q8N228 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
SCML4Q8N228 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.25■■□□□ 1.15
SCML4Q8N228 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SCML4Q8N228 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SCML4Q8N228 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC22.24■■□□□ 1.15
SCML4Q8N228 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.24■■□□□ 1.15
SCML4Q8N228 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
SCML4Q8N228 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.24■■□□□ 1.15
SCML4Q8N228 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SCML4Q8N228 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SCML4Q8N228 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SCML4Q8N228 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SCML4Q8N228 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.24■■□□□ 1.15
SCML4Q8N228 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SCML4Q8N228 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.24■■□□□ 1.15
SCML4Q8N228 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.23■■□□□ 1.15
SCML4Q8N228 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCML4Q8N228 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCML4Q8N228 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCML4Q8N228 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCML4Q8N228 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SCML4Q8N228 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCML4Q8N228 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCML4Q8N228 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC22.23■■□□□ 1.15
SCML4Q8N228 AC010141.2-201ENST00000452426 721 ntBASIC22.23■■□□□ 1.15
SCML4Q8N228 SERP1-208ENST00000491660 830 ntTSL 2 BASIC22.23■■□□□ 1.15
SCML4Q8N228 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SCML4Q8N228 AC010542.4-201ENST00000563151 1910 ntBASIC22.23■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms