Protein–RNA interactions for Protein: Q8IX18

DHX40, Probable ATP-dependent RNA helicase DHX40, humanhuman

Known RBP Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40Q8IX18 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DHX40Q8IX18 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
DHX40Q8IX18 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.73■■□□□ 1.39
DHX40Q8IX18 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DHX40Q8IX18 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
DHX40Q8IX18 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DHX40Q8IX18 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
DHX40Q8IX18 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
DHX40Q8IX18 MTURN-203ENST00000409688 843 ntTSL 2 BASIC23.73■■□□□ 1.39
DHX40Q8IX18 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.73■■□□□ 1.39
DHX40Q8IX18 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC23.73■■□□□ 1.39
DHX40Q8IX18 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.73■■□□□ 1.39
DHX40Q8IX18 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.73■■□□□ 1.39
DHX40Q8IX18 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
DHX40Q8IX18 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC23.72■■□□□ 1.39
DHX40Q8IX18 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC23.72■■□□□ 1.39
DHX40Q8IX18 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
DHX40Q8IX18 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
DHX40Q8IX18 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DHX40Q8IX18 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.72■■□□□ 1.39
DHX40Q8IX18 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DHX40Q8IX18 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.72■■□□□ 1.39
DHX40Q8IX18 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
DHX40Q8IX18 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DHX40Q8IX18 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DHX40Q8IX18 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
DHX40Q8IX18 FEM1AP1-201ENST00000431297 1995 ntBASIC23.71■■□□□ 1.39
DHX40Q8IX18 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
DHX40Q8IX18 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.71■■□□□ 1.39
DHX40Q8IX18 AL049796.1-201ENST00000565336 1766 ntBASIC23.71■■□□□ 1.39
DHX40Q8IX18 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
DHX40Q8IX18 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC23.71■■□□□ 1.39
DHX40Q8IX18 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC23.71■■□□□ 1.39
DHX40Q8IX18 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.71■■□□□ 1.39
DHX40Q8IX18 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
DHX40Q8IX18 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.71■■□□□ 1.39
DHX40Q8IX18 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
DHX40Q8IX18 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
DHX40Q8IX18 OXCT2P1-201ENST00000447263 1535 ntBASIC23.7■■□□□ 1.38
DHX40Q8IX18 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC23.7■■□□□ 1.38
DHX40Q8IX18 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DHX40Q8IX18 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DHX40Q8IX18 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
DHX40Q8IX18 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC23.7■■□□□ 1.38
DHX40Q8IX18 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DHX40Q8IX18 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
DHX40Q8IX18 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
DHX40Q8IX18 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 MIR6724-1-201ENST00000616420 92 ntBASIC23.69■■□□□ 1.38
DHX40Q8IX18 MIR6724-2-201ENST00000616483 92 ntBASIC23.69■■□□□ 1.38
DHX40Q8IX18 MIR6724-4-201ENST00000617390 92 ntBASIC23.69■■□□□ 1.38
DHX40Q8IX18 MIR6724-3-201ENST00000622482 92 ntBASIC23.69■■□□□ 1.38
DHX40Q8IX18 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
DHX40Q8IX18 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC23.69■■□□□ 1.38
DHX40Q8IX18 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
DHX40Q8IX18 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
DHX40Q8IX18 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.69■■□□□ 1.38
DHX40Q8IX18 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.68■■□□□ 1.38
DHX40Q8IX18 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.68■■□□□ 1.38
DHX40Q8IX18 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
DHX40Q8IX18 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
DHX40Q8IX18 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
DHX40Q8IX18 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DHX40Q8IX18 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
DHX40Q8IX18 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
DHX40Q8IX18 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.67■■□□□ 1.38
DHX40Q8IX18 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.67■■□□□ 1.38
DHX40Q8IX18 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DHX40Q8IX18 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
DHX40Q8IX18 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DHX40Q8IX18 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
DHX40Q8IX18 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.66■■□□□ 1.38
DHX40Q8IX18 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
DHX40Q8IX18 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
DHX40Q8IX18 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DHX40Q8IX18 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
DHX40Q8IX18 AC003102.1-202ENST00000563394 1796 ntBASIC23.66■■□□□ 1.38
DHX40Q8IX18 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DHX40Q8IX18 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
DHX40Q8IX18 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms