Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM48Q8IWZ4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM48Q8IWZ4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM48Q8IWZ4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM48Q8IWZ4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
TRIM48Q8IWZ4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM48Q8IWZ4 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM48Q8IWZ4 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM48Q8IWZ4 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM48Q8IWZ4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM48Q8IWZ4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM48Q8IWZ4 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.87■□□□□ 0.93
TRIM48Q8IWZ4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 AC004911.1-201ENST00000416316 871 ntBASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM48Q8IWZ4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 AC055733.4-201ENST00000638462 1354 ntBASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 KRT18P61-201ENST00000585825 1298 ntBASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.85■□□□□ 0.93
TRIM48Q8IWZ4 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 AC092437.1-201ENST00000624794 1048 ntBASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.84■□□□□ 0.93
TRIM48Q8IWZ4 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM48Q8IWZ4 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM48Q8IWZ4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM48Q8IWZ4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM48Q8IWZ4 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
TRIM48Q8IWZ4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
TRIM48Q8IWZ4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM48Q8IWZ4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM48Q8IWZ4 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM48Q8IWZ4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
TRIM48Q8IWZ4 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TRIM48Q8IWZ4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms