Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.97■□□□□ 0.95
APLFQ8IW19 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.97■□□□□ 0.95
APLFQ8IW19 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
APLFQ8IW19 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC20.97■□□□□ 0.95
APLFQ8IW19 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.97■□□□□ 0.95
APLFQ8IW19 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
APLFQ8IW19 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APLFQ8IW19 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
APLFQ8IW19 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
APLFQ8IW19 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
APLFQ8IW19 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.97■□□□□ 0.95
APLFQ8IW19 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
APLFQ8IW19 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APLFQ8IW19 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.96■□□□□ 0.95
APLFQ8IW19 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
APLFQ8IW19 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
APLFQ8IW19 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APLFQ8IW19 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
APLFQ8IW19 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APLFQ8IW19 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APLFQ8IW19 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
APLFQ8IW19 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APLFQ8IW19 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
APLFQ8IW19 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.95■□□□□ 0.95
APLFQ8IW19 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
APLFQ8IW19 MADCAM1-206ENST00000617201 1491 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
APLFQ8IW19 MADCAM1-207ENST00000619333 1485 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
APLFQ8IW19 MADCAM1-210ENST00000622462 1461 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
APLFQ8IW19 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
APLFQ8IW19 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
APLFQ8IW19 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
APLFQ8IW19 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.95■□□□□ 0.94
APLFQ8IW19 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
APLFQ8IW19 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APLFQ8IW19 AC126544.1-201ENST00000580842 1059 ntBASIC20.95■□□□□ 0.94
APLFQ8IW19 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APLFQ8IW19 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
APLFQ8IW19 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
APLFQ8IW19 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
APLFQ8IW19 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
APLFQ8IW19 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
APLFQ8IW19 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
APLFQ8IW19 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
APLFQ8IW19 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
APLFQ8IW19 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
APLFQ8IW19 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
APLFQ8IW19 YBX1P1-201ENST00000445822 960 ntBASIC20.94■□□□□ 0.94
APLFQ8IW19 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.94■□□□□ 0.94
APLFQ8IW19 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.94■□□□□ 0.94
APLFQ8IW19 pRNA.6-201ENST00000610482 90 ntBASIC20.94■□□□□ 0.94
APLFQ8IW19 pRNA.5-201ENST00000612139 90 ntBASIC20.94■□□□□ 0.94
APLFQ8IW19 pRNA.11-201ENST00000618423 90 ntBASIC20.94■□□□□ 0.94
APLFQ8IW19 pRNA.13-201ENST00000619112 90 ntBASIC20.94■□□□□ 0.94
APLFQ8IW19 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
APLFQ8IW19 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
APLFQ8IW19 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.94■□□□□ 0.94
APLFQ8IW19 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
APLFQ8IW19 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC20.94■□□□□ 0.94
APLFQ8IW19 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
APLFQ8IW19 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APLFQ8IW19 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.93■□□□□ 0.94
APLFQ8IW19 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
APLFQ8IW19 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC20.93■□□□□ 0.94
APLFQ8IW19 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
APLFQ8IW19 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
APLFQ8IW19 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.93■□□□□ 0.94
APLFQ8IW19 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.93■□□□□ 0.94
APLFQ8IW19 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.93■□□□□ 0.94
APLFQ8IW19 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APLFQ8IW19 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APLFQ8IW19 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
APLFQ8IW19 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
APLFQ8IW19 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
APLFQ8IW19 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.93■□□□□ 0.94
APLFQ8IW19 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
APLFQ8IW19 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
APLFQ8IW19 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.92■□□□□ 0.94
APLFQ8IW19 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APLFQ8IW19 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APLFQ8IW19 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.92■□□□□ 0.94
APLFQ8IW19 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APLFQ8IW19 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.92■□□□□ 0.94
APLFQ8IW19 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC20.92■□□□□ 0.94
APLFQ8IW19 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.92■□□□□ 0.94
APLFQ8IW19 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.92■□□□□ 0.94
APLFQ8IW19 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
APLFQ8IW19 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
APLFQ8IW19 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
APLFQ8IW19 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APLFQ8IW19 EI24-213ENST00000618552 1747 ntTSL 5 BASIC20.92■□□□□ 0.94
APLFQ8IW19 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
APLFQ8IW19 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
APLFQ8IW19 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APLFQ8IW19 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
APLFQ8IW19 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.91■□□□□ 0.94
APLFQ8IW19 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
APLFQ8IW19 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.91■□□□□ 0.94
APLFQ8IW19 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC20.91■□□□□ 0.94
APLFQ8IW19 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.91■□□□□ 0.94
APLFQ8IW19 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms