Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CPNE8Q86YQ8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
CPNE8Q86YQ8 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CPNE8Q86YQ8 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
CPNE8Q86YQ8 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC22.39■■□□□ 1.18
CPNE8Q86YQ8 AC135279.3-201ENST00000610945 1311 ntBASIC22.39■■□□□ 1.18
CPNE8Q86YQ8 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
CPNE8Q86YQ8 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
CPNE8Q86YQ8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.39■■□□□ 1.17
CPNE8Q86YQ8 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC22.39■■□□□ 1.17
CPNE8Q86YQ8 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 DYM-203ENST00000442713 2147 ntTSL 2 BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.38■■□□□ 1.17
CPNE8Q86YQ8 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 AC008406.3-201ENST00000620001 1374 ntBASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
CPNE8Q86YQ8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 AC008764.7-201ENST00000593779 1081 ntBASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 MAG-206ENST00000597035 542 ntTSL 4 BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 AC233992.3-201ENST00000607491 485 ntBASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 AC110285.6-201ENST00000617652 491 ntBASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
CPNE8Q86YQ8 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
CPNE8Q86YQ8 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 PBX2P1-201ENST00000493219 1291 ntBASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
CPNE8Q86YQ8 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC22.33■■□□□ 1.17
CPNE8Q86YQ8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE8Q86YQ8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.33■■□□□ 1.17
CPNE8Q86YQ8 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE8Q86YQ8 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE8Q86YQ8 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
CPNE8Q86YQ8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC22.33■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms