Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 FAM210CP-201ENST00000445714 574 ntBASIC27.14■■□□□ 1.94
COL23A1Q86Y22 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC27.14■■□□□ 1.94
COL23A1Q86Y22 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC27.14■■□□□ 1.94
COL23A1Q86Y22 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC27.14■■□□□ 1.94
COL23A1Q86Y22 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
COL23A1Q86Y22 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
COL23A1Q86Y22 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL23A1Q86Y22 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC27.13■■□□□ 1.93
COL23A1Q86Y22 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC27.13■■□□□ 1.93
COL23A1Q86Y22 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL23A1Q86Y22 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC27.13■■□□□ 1.93
COL23A1Q86Y22 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
COL23A1Q86Y22 AC008403.3-201ENST00000598924 454 ntBASIC27.13■■□□□ 1.93
COL23A1Q86Y22 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC27.13■■□□□ 1.93
COL23A1Q86Y22 AC073912.3-201ENST00000624414 853 ntBASIC27.13■■□□□ 1.93
COL23A1Q86Y22 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC27.13■■□□□ 1.93
COL23A1Q86Y22 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL23A1Q86Y22 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
COL23A1Q86Y22 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 MIR4497-201ENST00000583208 89 ntBASIC27.12■■□□□ 1.93
COL23A1Q86Y22 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 AL139125.2-201ENST00000623134 1869 ntBASIC27.12■■□□□ 1.93
COL23A1Q86Y22 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
COL23A1Q86Y22 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
COL23A1Q86Y22 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
COL23A1Q86Y22 GXYLT1P3-201ENST00000453058 1193 ntBASIC27.11■■□□□ 1.93
COL23A1Q86Y22 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC27.11■■□□□ 1.93
COL23A1Q86Y22 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL23A1Q86Y22 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
COL23A1Q86Y22 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 AC004812.2-201ENST00000611079 2094 ntBASIC27.1■■□□□ 1.93
COL23A1Q86Y22 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 AC211429.1-201ENST00000415277 523 ntBASIC27.1■■□□□ 1.93
COL23A1Q86Y22 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
COL23A1Q86Y22 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 GATS-209ENST00000454084 1030 ntTSL 3 BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 AL162412.1-201ENST00000567129 965 ntBASIC27.09■■□□□ 1.93
COL23A1Q86Y22 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
COL23A1Q86Y22 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC27.08■■□□□ 1.93
COL23A1Q86Y22 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
COL23A1Q86Y22 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL23A1Q86Y22 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC27.08■■□□□ 1.93
COL23A1Q86Y22 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC27.08■■□□□ 1.93
COL23A1Q86Y22 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC27.08■■□□□ 1.93
COL23A1Q86Y22 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC27.08■■□□□ 1.93
COL23A1Q86Y22 AL591742.1-201ENST00000604433 565 ntBASIC27.08■■□□□ 1.93
COL23A1Q86Y22 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC27.08■■□□□ 1.93
COL23A1Q86Y22 AC010331.1-201ENST00000611423 582 ntBASIC27.08■■□□□ 1.93
COL23A1Q86Y22 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
COL23A1Q86Y22 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 CBFB-203ENST00000561924 584 ntTSL 5 BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
COL23A1Q86Y22 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.06■■□□□ 1.92
COL23A1Q86Y22 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.06■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms