Protein–RNA interactions for Protein: Q86UF4

CCDC190, Coiled-coil domain-containing protein 190, humanhuman

Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC190Q86UF4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 GAK-223ENST00000628912 497 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCDC190Q86UF4 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.6■□□□□ 0.57
CCDC190Q86UF4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CCDC190Q86UF4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
CCDC190Q86UF4 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
CCDC190Q86UF4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CCDC190Q86UF4 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.58■□□□□ 0.57
CCDC190Q86UF4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
CCDC190Q86UF4 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC190Q86UF4 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC190Q86UF4 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC190Q86UF4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.58■□□□□ 0.56
CCDC190Q86UF4 AC009831.1-201ENST00000580420 1582 ntBASIC18.58■□□□□ 0.56
CCDC190Q86UF4 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CCDC190Q86UF4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
CCDC190Q86UF4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC190Q86UF4 AC006128.1-201ENST00000624704 1661 ntBASIC18.57■□□□□ 0.56
CCDC190Q86UF4 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 LONRF2P2-201ENST00000439212 571 ntBASIC18.56■□□□□ 0.56
CCDC190Q86UF4 MACF1-219ENST00000484793 834 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 AC018755.3-202ENST00000596210 929 ntBASIC18.56■□□□□ 0.56
CCDC190Q86UF4 AC022413.1-201ENST00000624602 984 ntBASIC18.56■□□□□ 0.56
CCDC190Q86UF4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC190Q86UF4 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms