Protein–RNA interactions for Protein: Q6PDB4

ZNF880, Zinc finger protein 880, humanhuman

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF880Q6PDB4 AL356441.2-201ENST00000443009 864 ntBASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 AP005435.1-201ENST00000529293 1178 ntBASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 AL034346.1-201ENST00000568244 1277 ntBASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 MIR4466-201ENST00000606121 54 ntBASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 AC136469.2-201ENST00000623944 1028 ntBASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 SYT6-210ENST00000641643 1587 ntBASIC17.83■□□□□ 0.44
ZNF880Q6PDB4 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 AC011298.3-201ENST00000615796 283 ntBASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ZNF880Q6PDB4 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 SF1-220ENST00000626028 704 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.81■□□□□ 0.44
ZNF880Q6PDB4 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF880Q6PDB4 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF880Q6PDB4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 SLC47A1P1-202ENST00000449666 945 ntBASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF880Q6PDB4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ZNF880Q6PDB4 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC17.77■□□□□ 0.43
ZNF880Q6PDB4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms