Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
LPCAT4Q643R3 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.09■□□□□ 0.81
LPCAT4Q643R3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LPCAT4Q643R3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC20.08■□□□□ 0.81
LPCAT4Q643R3 AC009086.3-201ENST00000623486 1008 ntBASIC20.08■□□□□ 0.81
LPCAT4Q643R3 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 AL049796.1-201ENST00000565336 1766 ntBASIC20.08■□□□□ 0.8
LPCAT4Q643R3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.08■□□□□ 0.8
LPCAT4Q643R3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 GPX1-201ENST00000419349 1106 ntBASIC20.07■□□□□ 0.8
LPCAT4Q643R3 MIR6765-201ENST00000614092 87 ntBASIC20.07■□□□□ 0.8
LPCAT4Q643R3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC20.07■□□□□ 0.8
LPCAT4Q643R3 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 AL592293.1-201ENST00000502889 1188 ntBASIC20.06■□□□□ 0.8
LPCAT4Q643R3 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.06■□□□□ 0.8
LPCAT4Q643R3 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 AC104564.3-201ENST00000582367 638 ntBASIC20.05■□□□□ 0.8
LPCAT4Q643R3 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LPCAT4Q643R3 FP325331.1-202ENST00000623531 1380 ntBASIC20.05■□□□□ 0.8
LPCAT4Q643R3 AC004687.1-201ENST00000579003 1625 ntBASIC20.05■□□□□ 0.8
LPCAT4Q643R3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms