Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 AC005224.4-201ENST00000583262 1652 ntBASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.87■□□□□ 0.77
HLA-DQA1Q5Y7H0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HLA-DQA1Q5Y7H0 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 RARRES2P6-201ENST00000567333 442 ntBASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 TPRG1LP1-201ENST00000598702 760 ntBASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
HLA-DQA1Q5Y7H0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 AC097381.1-201ENST00000429019 1296 ntBASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 MIR6821-201ENST00000617625 74 ntBASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
HLA-DQA1Q5Y7H0 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQA1Q5Y7H0 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQA1Q5Y7H0 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC19.83■□□□□ 0.77
HLA-DQA1Q5Y7H0 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.83■□□□□ 0.77
HLA-DQA1Q5Y7H0 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQA1Q5Y7H0 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQA1Q5Y7H0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.83■□□□□ 0.77
HLA-DQA1Q5Y7H0 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQA1Q5Y7H0 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
HLA-DQA1Q5Y7H0 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC19.83■□□□□ 0.77
HLA-DQA1Q5Y7H0 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
HLA-DQA1Q5Y7H0 AP006587.3-201ENST00000525742 1516 ntBASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
HLA-DQA1Q5Y7H0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQA1Q5Y7H0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HLA-DQA1Q5Y7H0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HLA-DQA1Q5Y7H0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQA1Q5Y7H0 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQA1Q5Y7H0 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
HLA-DQA1Q5Y7H0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HLA-DQA1Q5Y7H0 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC19.81■□□□□ 0.76
HLA-DQA1Q5Y7H0 AC079140.4-201ENST00000507448 529 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms