Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TM4SF20Q53R12 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 ECEL1P1-201ENST00000373592 1742 ntBASIC16.54■□□□□ 0.24
TM4SF20Q53R12 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 LSR-203ENST00000360798 1963 ntTSL 2 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TM4SF20Q53R12 OR7E47P-201ENST00000546390 1422 ntBASIC16.53■□□□□ 0.24
TM4SF20Q53R12 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
TM4SF20Q53R12 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
TM4SF20Q53R12 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TM4SF20Q53R12 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
TM4SF20Q53R12 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
TM4SF20Q53R12 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC16.52■□□□□ 0.23
TM4SF20Q53R12 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 AC105265.2-201ENST00000467189 838 ntBASIC16.51■□□□□ 0.23
TM4SF20Q53R12 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 AC092053.2-201ENST00000640557 1818 ntBASIC16.51■□□□□ 0.23
TM4SF20Q53R12 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
TM4SF20Q53R12 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC16.5■□□□□ 0.23
TM4SF20Q53R12 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms