Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 AC103724.3-201ENST00000564481 992 ntBASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.67■□□□□ 0.42
ANKRD55Q3KP44 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 TK2-216ENST00000564917 1156 ntTSL 3 BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
ANKRD55Q3KP44 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 OXCT2P1-201ENST00000447263 1535 ntBASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.65■□□□□ 0.42
ANKRD55Q3KP44 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.64■□□□□ 0.42
ANKRD55Q3KP44 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.64■□□□□ 0.42
ANKRD55Q3KP44 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.42
ANKRD55Q3KP44 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 C17orf82-201ENST00000623772 1530 ntBASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
ANKRD55Q3KP44 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC17.63■□□□□ 0.41
ANKRD55Q3KP44 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
ANKRD55Q3KP44 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 227.3 ms