Protein–RNA interactions for Protein: Q3KNV8

PCGF3, Polycomb group RING finger protein 3, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3Q3KNV8 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 MAG-206ENST00000597035 542 ntTSL 4 BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PCGF3Q3KNV8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 AC073130.3-201ENST00000624389 2278 ntBASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PCGF3Q3KNV8 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 AC005229.4-201ENST00000610085 2198 ntBASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 SLC47A1P1-202ENST00000449666 945 ntBASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 AC105265.2-201ENST00000467189 838 ntBASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 AC126544.1-201ENST00000580842 1059 ntBASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PCGF3Q3KNV8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 GRAMD4P2-201ENST00000423297 1097 ntBASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCGF3Q3KNV8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.77■□□□□ 0.6
PCGF3Q3KNV8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCGF3Q3KNV8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCGF3Q3KNV8 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.77■□□□□ 0.59
PCGF3Q3KNV8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PCGF3Q3KNV8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCGF3Q3KNV8 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms