Protein–RNA interactions for Protein: P82673

MRPS35, 28S ribosomal protein S35, mitochondrial, humanhuman

Known RBP Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS35P82673 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPS35P82673 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.81■□□□□ 0.92
MRPS35P82673 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC20.81■□□□□ 0.92
MRPS35P82673 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
MRPS35P82673 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPS35P82673 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC20.81■□□□□ 0.92
MRPS35P82673 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPS35P82673 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC20.81■□□□□ 0.92
MRPS35P82673 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
MRPS35P82673 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRPS35P82673 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
MRPS35P82673 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
MRPS35P82673 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MRPS35P82673 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPS35P82673 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
MRPS35P82673 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPS35P82673 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPS35P82673 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.8■□□□□ 0.92
MRPS35P82673 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.8■□□□□ 0.92
MRPS35P82673 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
MRPS35P82673 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.8■□□□□ 0.92
MRPS35P82673 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC20.8■□□□□ 0.92
MRPS35P82673 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.8■□□□□ 0.92
MRPS35P82673 AC131281.2-201ENST00000520478 145 ntBASIC20.8■□□□□ 0.92
MRPS35P82673 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.8■□□□□ 0.92
MRPS35P82673 DUX4L4-201ENST00000566884 1269 ntBASIC20.8■□□□□ 0.92
MRPS35P82673 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPS35P82673 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPS35P82673 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPS35P82673 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
MRPS35P82673 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.8■□□□□ 0.92
MRPS35P82673 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
MRPS35P82673 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.79■□□□□ 0.92
MRPS35P82673 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
MRPS35P82673 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.79■□□□□ 0.92
MRPS35P82673 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.79■□□□□ 0.92
MRPS35P82673 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
MRPS35P82673 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 MIR4466-201ENST00000606121 54 ntBASIC20.79■□□□□ 0.92
MRPS35P82673 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
MRPS35P82673 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
MRPS35P82673 GATM-206ENST00000558336 1522 ntTSL 2 BASIC20.78■□□□□ 0.92
MRPS35P82673 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.78■□□□□ 0.92
MRPS35P82673 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPS35P82673 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPS35P82673 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MRPS35P82673 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.78■□□□□ 0.92
MRPS35P82673 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.78■□□□□ 0.92
MRPS35P82673 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC20.78■□□□□ 0.92
MRPS35P82673 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.78■□□□□ 0.92
MRPS35P82673 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
MRPS35P82673 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MRPS35P82673 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPS35P82673 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
MRPS35P82673 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
MRPS35P82673 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPS35P82673 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPS35P82673 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MRPS35P82673 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MRPS35P82673 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
MRPS35P82673 AC006455.2-201ENST00000429931 906 ntBASIC20.77■□□□□ 0.92
MRPS35P82673 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC20.77■□□□□ 0.92
MRPS35P82673 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MRPS35P82673 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
MRPS35P82673 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
MRPS35P82673 AC099791.2-201ENST00000605725 427 ntBASIC20.77■□□□□ 0.92
MRPS35P82673 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.77■□□□□ 0.92
MRPS35P82673 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPS35P82673 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPS35P82673 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
MRPS35P82673 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
MRPS35P82673 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.77■□□□□ 0.92
MRPS35P82673 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MRPS35P82673 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
MRPS35P82673 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.76■□□□□ 0.91
MRPS35P82673 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPS35P82673 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPS35P82673 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPS35P82673 SRD5A1P1-201ENST00000442297 786 ntBASIC20.76■□□□□ 0.91
MRPS35P82673 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.76■□□□□ 0.91
MRPS35P82673 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPS35P82673 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPS35P82673 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.76■□□□□ 0.91
MRPS35P82673 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
MRPS35P82673 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
MRPS35P82673 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPS35P82673 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPS35P82673 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
MRPS35P82673 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
MRPS35P82673 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms