Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSX2P58304 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.42■□□□□ 0.86
VSX2P58304 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.42■□□□□ 0.86
VSX2P58304 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.42■□□□□ 0.86
VSX2P58304 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.42■□□□□ 0.86
VSX2P58304 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.42■□□□□ 0.86
VSX2P58304 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.42■□□□□ 0.86
VSX2P58304 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSX2P58304 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSX2P58304 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSX2P58304 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
VSX2P58304 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSX2P58304 AC004854.2-201ENST00000608450 1441 ntBASIC20.42■□□□□ 0.86
VSX2P58304 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
VSX2P58304 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.41■□□□□ 0.86
VSX2P58304 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC20.41■□□□□ 0.86
VSX2P58304 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.41■□□□□ 0.86
VSX2P58304 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VSX2P58304 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSX2P58304 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.41■□□□□ 0.86
VSX2P58304 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC20.41■□□□□ 0.86
VSX2P58304 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.41■□□□□ 0.86
VSX2P58304 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.41■□□□□ 0.86
VSX2P58304 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VSX2P58304 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSX2P58304 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.41■□□□□ 0.86
VSX2P58304 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSX2P58304 AP004607.4-201ENST00000530158 1459 ntBASIC20.41■□□□□ 0.86
VSX2P58304 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
VSX2P58304 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
VSX2P58304 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSX2P58304 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSX2P58304 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
VSX2P58304 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.41■□□□□ 0.86
VSX2P58304 AC242852.2-201ENST00000615738 1807 ntBASIC20.41■□□□□ 0.86
VSX2P58304 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
VSX2P58304 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.41■□□□□ 0.86
VSX2P58304 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX2P58304 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX2P58304 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
VSX2P58304 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX2P58304 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX2P58304 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX2P58304 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.4■□□□□ 0.86
VSX2P58304 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.4■□□□□ 0.86
VSX2P58304 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.4■□□□□ 0.86
VSX2P58304 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.4■□□□□ 0.86
VSX2P58304 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
VSX2P58304 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.4■□□□□ 0.86
VSX2P58304 KRT18P61-201ENST00000585825 1298 ntBASIC20.4■□□□□ 0.86
VSX2P58304 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.4■□□□□ 0.86
VSX2P58304 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX2P58304 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX2P58304 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VSX2P58304 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.4■□□□□ 0.86
VSX2P58304 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.39■□□□□ 0.86
VSX2P58304 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VSX2P58304 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.39■□□□□ 0.86
VSX2P58304 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.39■□□□□ 0.85
VSX2P58304 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VSX2P58304 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.39■□□□□ 0.85
VSX2P58304 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.39■□□□□ 0.85
VSX2P58304 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.39■□□□□ 0.85
VSX2P58304 AC022517.1-201ENST00000592429 346 ntBASIC20.39■□□□□ 0.85
VSX2P58304 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VSX2P58304 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VSX2P58304 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
VSX2P58304 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
VSX2P58304 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
VSX2P58304 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VSX2P58304 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VSX2P58304 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VSX2P58304 KRT87P-202ENST00000534226 1464 ntBASIC20.38■□□□□ 0.85
VSX2P58304 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VSX2P58304 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
VSX2P58304 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.38■□□□□ 0.85
VSX2P58304 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.38■□□□□ 0.85
VSX2P58304 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.38■□□□□ 0.85
VSX2P58304 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.38■□□□□ 0.85
VSX2P58304 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.38■□□□□ 0.85
VSX2P58304 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
VSX2P58304 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
VSX2P58304 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VSX2P58304 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VSX2P58304 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VSX2P58304 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VSX2P58304 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VSX2P58304 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.37■□□□□ 0.85
VSX2P58304 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VSX2P58304 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VSX2P58304 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VSX2P58304 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
VSX2P58304 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VSX2P58304 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.37■□□□□ 0.85
VSX2P58304 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
VSX2P58304 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
VSX2P58304 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VSX2P58304 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.37■□□□□ 0.85
VSX2P58304 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
VSX2P58304 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms