Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMC4P56277 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.9■□□□□ 0.14
CMC4P56277 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC15.9■□□□□ 0.14
CMC4P56277 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMC4P56277 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC15.9■□□□□ 0.14
CMC4P56277 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.9■□□□□ 0.14
CMC4P56277 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.9■□□□□ 0.14
CMC4P56277 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC15.9■□□□□ 0.14
CMC4P56277 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
CMC4P56277 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC15.9■□□□□ 0.14
CMC4P56277 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CMC4P56277 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
CMC4P56277 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CMC4P56277 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CMC4P56277 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
CMC4P56277 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC15.9■□□□□ 0.14
CMC4P56277 C9orf163-202ENST00000624034 2573 ntBASIC15.89■□□□□ 0.13
CMC4P56277 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CMC4P56277 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
CMC4P56277 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC15.89■□□□□ 0.13
CMC4P56277 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC15.89■□□□□ 0.13
CMC4P56277 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CMC4P56277 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
CMC4P56277 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CMC4P56277 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC15.89■□□□□ 0.13
CMC4P56277 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CMC4P56277 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC15.89■□□□□ 0.13
CMC4P56277 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC15.89■□□□□ 0.13
CMC4P56277 CCDC92B-201ENST00000575506 885 ntBASIC15.89■□□□□ 0.13
CMC4P56277 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
CMC4P56277 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CMC4P56277 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.89■□□□□ 0.13
CMC4P56277 MFF-207ENST00000409565 1548 ntTSL 2 BASIC15.89■□□□□ 0.13
CMC4P56277 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 AC055733.4-201ENST00000638462 1354 ntBASIC15.88■□□□□ 0.13
CMC4P56277 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 AC080038.3-201ENST00000623346 1952 ntBASIC15.88■□□□□ 0.13
CMC4P56277 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
CMC4P56277 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC15.88■□□□□ 0.13
CMC4P56277 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.88■□□□□ 0.13
CMC4P56277 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CMC4P56277 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC15.88■□□□□ 0.13
CMC4P56277 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CMC4P56277 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC15.87■□□□□ 0.13
CMC4P56277 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC15.87■□□□□ 0.13
CMC4P56277 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CMC4P56277 AL117328.2-201ENST00000624617 1940 ntBASIC15.86■□□□□ 0.13
CMC4P56277 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMC4P56277 KRT87P-202ENST00000534226 1464 ntBASIC15.86■□□□□ 0.13
CMC4P56277 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
CMC4P56277 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
CMC4P56277 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC15.86■□□□□ 0.13
CMC4P56277 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.86■□□□□ 0.13
CMC4P56277 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
CMC4P56277 KRT19P1-201ENST00000405746 1186 ntBASIC15.86■□□□□ 0.13
CMC4P56277 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.86■□□□□ 0.13
CMC4P56277 AC026271.2-201ENST00000428091 497 ntBASIC15.86■□□□□ 0.13
CMC4P56277 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC15.86■□□□□ 0.13
CMC4P56277 TESC-206ENST00000541210 936 ntTSL 3 BASIC15.86■□□□□ 0.13
CMC4P56277 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC15.86■□□□□ 0.13
CMC4P56277 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMC4P56277 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
CMC4P56277 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC15.86■□□□□ 0.13
CMC4P56277 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC15.85■□□□□ 0.13
CMC4P56277 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
CMC4P56277 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC15.85■□□□□ 0.13
CMC4P56277 COX20-201ENST00000366528 568 ntTSL 2 BASIC15.85■□□□□ 0.13
CMC4P56277 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.85■□□□□ 0.13
CMC4P56277 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.85■□□□□ 0.13
CMC4P56277 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CMC4P56277 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms