Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC20.84■□□□□ 0.93
CDH13P55290 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH13P55290 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH13P55290 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH13P55290 AC104564.3-201ENST00000582367 638 ntBASIC20.84■□□□□ 0.93
CDH13P55290 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC20.84■□□□□ 0.93
CDH13P55290 AC011298.3-201ENST00000615796 283 ntBASIC20.84■□□□□ 0.93
CDH13P55290 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH13P55290 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.84■□□□□ 0.93
CDH13P55290 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CDH13P55290 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CDH13P55290 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH13P55290 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH13P55290 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CDH13P55290 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.84■□□□□ 0.93
CDH13P55290 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH13P55290 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH13P55290 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.83■□□□□ 0.93
CDH13P55290 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CDH13P55290 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
CDH13P55290 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH13P55290 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CDH13P55290 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH13P55290 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH13P55290 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CDH13P55290 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.82■□□□□ 0.92
CDH13P55290 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH13P55290 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.82■□□□□ 0.92
CDH13P55290 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC20.82■□□□□ 0.92
CDH13P55290 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
CDH13P55290 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.82■□□□□ 0.92
CDH13P55290 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
CDH13P55290 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH13P55290 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH13P55290 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH13P55290 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH13P55290 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.81■□□□□ 0.92
CDH13P55290 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.81■□□□□ 0.92
CDH13P55290 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH13P55290 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH13P55290 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH13P55290 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH13P55290 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH13P55290 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CDH13P55290 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CDH13P55290 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CDH13P55290 AP004607.7-201ENST00000527152 1677 ntBASIC20.8■□□□□ 0.92
CDH13P55290 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDH13P55290 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH13P55290 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.8■□□□□ 0.92
CDH13P55290 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH13P55290 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.8■□□□□ 0.92
CDH13P55290 AP005435.1-201ENST00000529293 1178 ntBASIC20.8■□□□□ 0.92
CDH13P55290 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH13P55290 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CDH13P55290 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.8■□□□□ 0.92
CDH13P55290 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH13P55290 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CDH13P55290 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH13P55290 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH13P55290 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
CDH13P55290 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH13P55290 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH13P55290 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH13P55290 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CDH13P55290 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH13P55290 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH13P55290 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH13P55290 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH13P55290 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CDH13P55290 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH13P55290 AL136116.3-201ENST00000402907 1138 ntBASIC20.79■□□□□ 0.92
CDH13P55290 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH13P55290 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH13P55290 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.79■□□□□ 0.92
CDH13P55290 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.79■□□□□ 0.92
CDH13P55290 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.79■□□□□ 0.92
CDH13P55290 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH13P55290 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CDH13P55290 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
CDH13P55290 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH13P55290 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH13P55290 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH13P55290 AC003102.1-202ENST00000563394 1796 ntBASIC20.78■□□□□ 0.92
CDH13P55290 SNX3-202ENST00000349379 890 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH13P55290 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.78■□□□□ 0.92
CDH13P55290 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH13P55290 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CDH13P55290 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms