Protein–RNA interactions for Protein: P48066

SLC6A11, Sodium- and chloride-dependent GABA transporter 3, humanhuman

Predictions only

Length 632 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A11P48066 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.79■■□□□ 1.08
SLC6A11P48066 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A11P48066 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
SLC6A11P48066 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC21.79■■□□□ 1.08
SLC6A11P48066 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A11P48066 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A11P48066 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A11P48066 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
SLC6A11P48066 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
SLC6A11P48066 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC6A11P48066 AC142086.2-201ENST00000569753 217 ntBASIC21.79■■□□□ 1.08
SLC6A11P48066 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A11P48066 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A11P48066 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC21.79■■□□□ 1.08
SLC6A11P48066 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A11P48066 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.79■■□□□ 1.08
SLC6A11P48066 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
SLC6A11P48066 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A11P48066 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.78■■□□□ 1.08
SLC6A11P48066 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC6A11P48066 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.78■■□□□ 1.08
SLC6A11P48066 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.78■■□□□ 1.08
SLC6A11P48066 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21.78■■□□□ 1.08
SLC6A11P48066 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A11P48066 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A11P48066 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
SLC6A11P48066 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
SLC6A11P48066 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A11P48066 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC6A11P48066 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A11P48066 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC21.77■■□□□ 1.08
SLC6A11P48066 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A11P48066 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A11P48066 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A11P48066 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A11P48066 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
SLC6A11P48066 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.77■■□□□ 1.07
SLC6A11P48066 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC6A11P48066 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
SLC6A11P48066 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
SLC6A11P48066 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.76■■□□□ 1.07
SLC6A11P48066 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A11P48066 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A11P48066 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC21.76■■□□□ 1.07
SLC6A11P48066 TERF1P5-201ENST00000477545 1207 ntBASIC21.76■■□□□ 1.07
SLC6A11P48066 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.76■■□□□ 1.07
SLC6A11P48066 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
SLC6A11P48066 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A11P48066 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
SLC6A11P48066 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC6A11P48066 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A11P48066 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A11P48066 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A11P48066 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A11P48066 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A11P48066 ABHD17AP1-201ENST00000358206 933 ntBASIC21.75■■□□□ 1.07
SLC6A11P48066 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A11P48066 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.75■■□□□ 1.07
SLC6A11P48066 AF201337.1-201ENST00000520239 748 ntBASIC21.75■■□□□ 1.07
SLC6A11P48066 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
SLC6A11P48066 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.75■■□□□ 1.07
SLC6A11P48066 AC105036.2-201ENST00000569468 176 ntBASIC21.75■■□□□ 1.07
SLC6A11P48066 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC21.75■■□□□ 1.07
SLC6A11P48066 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A11P48066 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.75■■□□□ 1.07
SLC6A11P48066 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A11P48066 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SLC6A11P48066 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.75■■□□□ 1.07
SLC6A11P48066 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.74■■□□□ 1.07
SLC6A11P48066 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC21.74■■□□□ 1.07
SLC6A11P48066 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A11P48066 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
SLC6A11P48066 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A11P48066 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.74■■□□□ 1.07
SLC6A11P48066 SLC7A5P1-201ENST00000568957 537 ntBASIC21.74■■□□□ 1.07
SLC6A11P48066 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC21.74■■□□□ 1.07
SLC6A11P48066 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A11P48066 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A11P48066 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC21.74■■□□□ 1.07
SLC6A11P48066 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
SLC6A11P48066 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SLC6A11P48066 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SLC6A11P48066 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A11P48066 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SLC6A11P48066 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC6A11P48066 SLC29A4P1-201ENST00000398760 971 ntBASIC21.73■■□□□ 1.07
SLC6A11P48066 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.73■■□□□ 1.07
SLC6A11P48066 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC6A11P48066 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC21.73■■□□□ 1.07
SLC6A11P48066 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC21.73■■□□□ 1.07
SLC6A11P48066 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A11P48066 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A11P48066 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A11P48066 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SLC6A11P48066 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.73■■□□□ 1.07
SLC6A11P48066 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.72■■□□□ 1.07
SLC6A11P48066 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SLC6A11P48066 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC6A11P48066 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC21.72■■□□□ 1.07
SLC6A11P48066 AC133552.2-202ENST00000575694 574 ntBASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms