Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SSR2P43308 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSR2P43308 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.35■□□□□ 0.85
SSR2P43308 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSR2P43308 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSR2P43308 IRS3P-201ENST00000223076 1006 ntBASIC20.35■□□□□ 0.85
SSR2P43308 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC20.35■□□□□ 0.85
SSR2P43308 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.35■□□□□ 0.85
SSR2P43308 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SSR2P43308 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.35■□□□□ 0.85
SSR2P43308 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSR2P43308 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
SSR2P43308 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.35■□□□□ 0.85
SSR2P43308 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.35■□□□□ 0.85
SSR2P43308 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.35■□□□□ 0.85
SSR2P43308 AL354811.1-201ENST00000610286 706 ntBASIC20.35■□□□□ 0.85
SSR2P43308 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.35■□□□□ 0.85
SSR2P43308 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SSR2P43308 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR2P43308 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR2P43308 BX005040.4-201ENST00000637145 1518 ntBASIC20.34■□□□□ 0.85
SSR2P43308 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.34■□□□□ 0.85
SSR2P43308 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR2P43308 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.34■□□□□ 0.85
SSR2P43308 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSR2P43308 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.34■□□□□ 0.85
SSR2P43308 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.34■□□□□ 0.85
SSR2P43308 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.34■□□□□ 0.85
SSR2P43308 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.34■□□□□ 0.85
SSR2P43308 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SSR2P43308 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR2P43308 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.34■□□□□ 0.85
SSR2P43308 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.34■□□□□ 0.85
SSR2P43308 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.34■□□□□ 0.85
SSR2P43308 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR2P43308 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR2P43308 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.34■□□□□ 0.85
SSR2P43308 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR2P43308 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
SSR2P43308 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR2P43308 AP006587.3-201ENST00000525742 1516 ntBASIC20.33■□□□□ 0.85
SSR2P43308 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
SSR2P43308 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
SSR2P43308 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.33■□□□□ 0.85
SSR2P43308 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.33■□□□□ 0.85
SSR2P43308 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.33■□□□□ 0.85
SSR2P43308 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SSR2P43308 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
SSR2P43308 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
SSR2P43308 AL358852.1-201ENST00000623174 1268 ntBASIC20.33■□□□□ 0.85
SSR2P43308 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSR2P43308 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
SSR2P43308 AC009237.3-201ENST00000393279 1427 ntBASIC20.33■□□□□ 0.84
SSR2P43308 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSR2P43308 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.33■□□□□ 0.84
SSR2P43308 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.84
SSR2P43308 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SSR2P43308 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR2P43308 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC20.32■□□□□ 0.84
SSR2P43308 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR2P43308 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR2P43308 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR2P43308 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR2P43308 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
SSR2P43308 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.32■□□□□ 0.84
SSR2P43308 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SSR2P43308 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.32■□□□□ 0.84
SSR2P43308 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC20.32■□□□□ 0.84
SSR2P43308 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SSR2P43308 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR2P43308 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SSR2P43308 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR2P43308 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.31■□□□□ 0.84
SSR2P43308 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.31■□□□□ 0.84
SSR2P43308 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR2P43308 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR2P43308 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR2P43308 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR2P43308 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC20.31■□□□□ 0.84
SSR2P43308 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC20.31■□□□□ 0.84
SSR2P43308 MIR6084-201ENST00000622012 110 ntBASIC20.31■□□□□ 0.84
SSR2P43308 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SSR2P43308 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.31■□□□□ 0.84
SSR2P43308 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR2P43308 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SSR2P43308 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SSR2P43308 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SSR2P43308 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR2P43308 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR2P43308 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SSR2P43308 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR2P43308 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SSR2P43308 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SSR2P43308 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.3■□□□□ 0.84
SSR2P43308 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.3■□□□□ 0.84
SSR2P43308 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.3■□□□□ 0.84
SSR2P43308 AC104564.3-201ENST00000582367 638 ntBASIC20.3■□□□□ 0.84
SSR2P43308 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms