Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.86■□□□□ 0.61
HOXC12P31275 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC12P31275 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.86■□□□□ 0.61
HOXC12P31275 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HOXC12P31275 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC12P31275 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXC12P31275 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC18.86■□□□□ 0.61
HOXC12P31275 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HOXC12P31275 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
HOXC12P31275 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC18.85■□□□□ 0.61
HOXC12P31275 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HOXC12P31275 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.85■□□□□ 0.61
HOXC12P31275 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 AC137767.1-201ENST00000602918 1920 ntBASIC18.85■□□□□ 0.61
HOXC12P31275 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
HOXC12P31275 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.85■□□□□ 0.61
HOXC12P31275 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.85■□□□□ 0.61
HOXC12P31275 AC073111.5-205ENST00000641717 521 ntBASIC18.85■□□□□ 0.61
HOXC12P31275 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HOXC12P31275 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
HOXC12P31275 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
HOXC12P31275 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXC12P31275 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
HOXC12P31275 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXC12P31275 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXC12P31275 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC18.84■□□□□ 0.61
HOXC12P31275 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HOXC12P31275 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.84■□□□□ 0.61
HOXC12P31275 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
HOXC12P31275 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.84■□□□□ 0.61
HOXC12P31275 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.84■□□□□ 0.61
HOXC12P31275 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
HOXC12P31275 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
HOXC12P31275 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.83■□□□□ 0.61
HOXC12P31275 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.83■□□□□ 0.61
HOXC12P31275 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC12P31275 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXC12P31275 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC12P31275 AC016769.1-201ENST00000409132 1010 ntBASIC18.83■□□□□ 0.6
HOXC12P31275 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.83■□□□□ 0.6
HOXC12P31275 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC12P31275 AC104771.1-201ENST00000603335 964 ntBASIC18.83■□□□□ 0.6
HOXC12P31275 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXC12P31275 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC12P31275 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HOXC12P31275 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC12P31275 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
HOXC12P31275 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXC12P31275 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC18.83■□□□□ 0.6
HOXC12P31275 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC12P31275 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC12P31275 LINC00526-201ENST00000581067 1875 ntBASIC18.82■□□□□ 0.6
HOXC12P31275 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC12P31275 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC12P31275 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
HOXC12P31275 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HOXC12P31275 AC026185.1-201ENST00000445748 174 ntBASIC18.82■□□□□ 0.6
HOXC12P31275 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC12P31275 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC12P31275 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC12P31275 TPRG1LP1-201ENST00000598702 760 ntBASIC18.82■□□□□ 0.6
HOXC12P31275 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC12P31275 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXC12P31275 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXC12P31275 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXC12P31275 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.81■□□□□ 0.6
HOXC12P31275 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
HOXC12P31275 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC12P31275 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC12P31275 AC139530.1-201ENST00000575312 1977 ntBASIC18.81■□□□□ 0.6
HOXC12P31275 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXC12P31275 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC12P31275 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXC12P31275 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
HOXC12P31275 AC079140.4-201ENST00000507448 529 ntBASIC18.81■□□□□ 0.6
HOXC12P31275 PPP1R14BP3-201ENST00000509033 445 ntBASIC18.81■□□□□ 0.6
HOXC12P31275 AC137761.2-201ENST00000561729 223 ntBASIC18.81■□□□□ 0.6
HOXC12P31275 AC145350.3-201ENST00000569033 163 ntBASIC18.81■□□□□ 0.6
HOXC12P31275 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms