Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL1P22362 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL1P22362 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL1P22362 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCL1P22362 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.39■□□□□ 0.53
CCL1P22362 MIR4767-201ENST00000582827 78 ntBASIC18.39■□□□□ 0.53
CCL1P22362 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL1P22362 SMUG1P1-201ENST00000590640 811 ntBASIC18.39■□□□□ 0.53
CCL1P22362 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.39■□□□□ 0.53
CCL1P22362 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.39■□□□□ 0.53
CCL1P22362 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.39■□□□□ 0.53
CCL1P22362 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
CCL1P22362 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CCL1P22362 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
CCL1P22362 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL1P22362 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CCL1P22362 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.38■□□□□ 0.53
CCL1P22362 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
CCL1P22362 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.38■□□□□ 0.53
CCL1P22362 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL1P22362 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL1P22362 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.38■□□□□ 0.53
CCL1P22362 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
CCL1P22362 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL1P22362 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.38■□□□□ 0.53
CCL1P22362 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
CCL1P22362 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.37■□□□□ 0.53
CCL1P22362 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCL1P22362 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL1P22362 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL1P22362 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL1P22362 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL1P22362 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL1P22362 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL1P22362 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL1P22362 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL1P22362 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.37■□□□□ 0.53
CCL1P22362 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL1P22362 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
CCL1P22362 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL1P22362 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCL1P22362 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCL1P22362 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
CCL1P22362 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
CCL1P22362 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCL1P22362 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 UNC93B3-201ENST00000308076 687 ntBASIC18.36■□□□□ 0.53
CCL1P22362 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL1P22362 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL1P22362 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.36■□□□□ 0.53
CCL1P22362 AC233992.3-201ENST00000607491 485 ntBASIC18.36■□□□□ 0.53
CCL1P22362 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.36■□□□□ 0.53
CCL1P22362 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
CCL1P22362 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCL1P22362 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCL1P22362 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.35■□□□□ 0.53
CCL1P22362 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.35■□□□□ 0.53
CCL1P22362 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.35■□□□□ 0.53
CCL1P22362 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCL1P22362 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.35■□□□□ 0.53
CCL1P22362 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.35■□□□□ 0.53
CCL1P22362 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.35■□□□□ 0.53
CCL1P22362 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.35■□□□□ 0.53
CCL1P22362 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCL1P22362 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCL1P22362 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCL1P22362 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCL1P22362 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CCL1P22362 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CCL1P22362 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CCL1P22362 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.34■□□□□ 0.53
CCL1P22362 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCL1P22362 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms