Protein–RNA interactions for Protein: P17980

PSMC3, 26S proteasome regulatory subunit 6A, humanhuman

Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3P17980 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC22.24■■□□□ 1.15
PSMC3P17980 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.24■■□□□ 1.15
PSMC3P17980 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
PSMC3P17980 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSMC3P17980 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSMC3P17980 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSMC3P17980 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
PSMC3P17980 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSMC3P17980 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSMC3P17980 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSMC3P17980 SLC29A4P1-201ENST00000398760 971 ntBASIC22.23■■□□□ 1.15
PSMC3P17980 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC22.23■■□□□ 1.15
PSMC3P17980 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
PSMC3P17980 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
PSMC3P17980 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
PSMC3P17980 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
PSMC3P17980 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
PSMC3P17980 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.22■■□□□ 1.15
PSMC3P17980 ANOS2P-203ENST00000472227 1816 ntBASIC22.22■■□□□ 1.15
PSMC3P17980 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.22■■□□□ 1.15
PSMC3P17980 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
PSMC3P17980 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PSMC3P17980 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
PSMC3P17980 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
PSMC3P17980 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC22.22■■□□□ 1.15
PSMC3P17980 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.22■■□□□ 1.15
PSMC3P17980 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC22.22■■□□□ 1.15
PSMC3P17980 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC22.22■■□□□ 1.15
PSMC3P17980 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC22.22■■□□□ 1.15
PSMC3P17980 AC092068.2-201ENST00000590491 1708 ntBASIC22.22■■□□□ 1.15
PSMC3P17980 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PSMC3P17980 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
PSMC3P17980 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PSMC3P17980 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSMC3P17980 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC22.21■■□□□ 1.15
PSMC3P17980 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
PSMC3P17980 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
PSMC3P17980 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSMC3P17980 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
PSMC3P17980 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.21■■□□□ 1.15
PSMC3P17980 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSMC3P17980 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC22.21■■□□□ 1.15
PSMC3P17980 FXN-202ENST00000396364 980 ntTSL 5 BASIC22.21■■□□□ 1.15
PSMC3P17980 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.21■■□□□ 1.15
PSMC3P17980 KRT18P20-201ENST00000548986 1279 ntBASIC22.21■■□□□ 1.15
PSMC3P17980 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC22.21■■□□□ 1.15
PSMC3P17980 PFKL-212ENST00000628044 129 ntTSL 3 BASIC22.21■■□□□ 1.15
PSMC3P17980 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSMC3P17980 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSMC3P17980 LINC01960-201ENST00000563759 1884 ntBASIC22.21■■□□□ 1.15
PSMC3P17980 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSMC3P17980 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSMC3P17980 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
PSMC3P17980 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
PSMC3P17980 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC22.2■■□□□ 1.15
PSMC3P17980 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PSMC3P17980 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC22.2■■□□□ 1.14
PSMC3P17980 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.2■■□□□ 1.14
PSMC3P17980 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
PSMC3P17980 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
PSMC3P17980 KRT18P6-201ENST00000555540 1265 ntBASIC22.2■■□□□ 1.14
PSMC3P17980 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC22.2■■□□□ 1.14
PSMC3P17980 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC22.2■■□□□ 1.14
PSMC3P17980 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC22.2■■□□□ 1.14
PSMC3P17980 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC22.2■■□□□ 1.14
PSMC3P17980 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
PSMC3P17980 AP004607.7-201ENST00000527152 1677 ntBASIC22.2■■□□□ 1.14
PSMC3P17980 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PSMC3P17980 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PSMC3P17980 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
PSMC3P17980 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PSMC3P17980 AC010141.2-201ENST00000452426 721 ntBASIC22.19■■□□□ 1.14
PSMC3P17980 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.19■■□□□ 1.14
PSMC3P17980 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PSMC3P17980 AL138781.1-201ENST00000566567 1274 ntBASIC22.19■■□□□ 1.14
PSMC3P17980 AC138907.5-202ENST00000569484 235 ntBASIC22.19■■□□□ 1.14
PSMC3P17980 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.19■■□□□ 1.14
PSMC3P17980 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
PSMC3P17980 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC22.19■■□□□ 1.14
PSMC3P17980 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
PSMC3P17980 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC22.19■■□□□ 1.14
PSMC3P17980 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
PSMC3P17980 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PSMC3P17980 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PSMC3P17980 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.18■■□□□ 1.14
PSMC3P17980 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PSMC3P17980 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.18■■□□□ 1.14
PSMC3P17980 CNN2P6-201ENST00000439038 900 ntBASIC22.18■■□□□ 1.14
PSMC3P17980 TSPY20P-201ENST00000450910 630 ntBASIC22.18■■□□□ 1.14
PSMC3P17980 RGMA-211ENST00000557420 989 ntTSL 3 BASIC22.18■■□□□ 1.14
PSMC3P17980 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
PSMC3P17980 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
PSMC3P17980 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
PSMC3P17980 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.18■■□□□ 1.14
PSMC3P17980 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
PSMC3P17980 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
PSMC3P17980 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PSMC3P17980 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PSMC3P17980 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
PSMC3P17980 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms