Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.26■□□□□ 0.35
DEFA4P12838 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 AC133637.1-201ENST00000624115 1537 ntBASIC17.26■□□□□ 0.35
DEFA4P12838 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC17.26■□□□□ 0.35
DEFA4P12838 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
DEFA4P12838 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DEFA4P12838 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
DEFA4P12838 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DEFA4P12838 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
DEFA4P12838 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DEFA4P12838 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
DEFA4P12838 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
DEFA4P12838 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.25■□□□□ 0.35
DEFA4P12838 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC17.25■□□□□ 0.35
DEFA4P12838 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC17.25■□□□□ 0.35
DEFA4P12838 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.25■□□□□ 0.35
DEFA4P12838 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
DEFA4P12838 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DEFA4P12838 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DEFA4P12838 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
DEFA4P12838 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DEFA4P12838 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
DEFA4P12838 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DEFA4P12838 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DEFA4P12838 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
DEFA4P12838 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC17.25■□□□□ 0.35
DEFA4P12838 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA4P12838 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA4P12838 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA4P12838 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA4P12838 AC006455.2-201ENST00000429931 906 ntBASIC17.24■□□□□ 0.35
DEFA4P12838 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.24■□□□□ 0.35
DEFA4P12838 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.24■□□□□ 0.35
DEFA4P12838 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC17.24■□□□□ 0.35
DEFA4P12838 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC17.24■□□□□ 0.35
DEFA4P12838 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA4P12838 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA4P12838 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.24■□□□□ 0.35
DEFA4P12838 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
DEFA4P12838 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA4P12838 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA4P12838 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA4P12838 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
DEFA4P12838 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
DEFA4P12838 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
DEFA4P12838 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC17.23■□□□□ 0.35
DEFA4P12838 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC17.23■□□□□ 0.35
DEFA4P12838 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.23■□□□□ 0.35
DEFA4P12838 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.23■□□□□ 0.35
DEFA4P12838 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.23■□□□□ 0.35
DEFA4P12838 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
DEFA4P12838 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
DEFA4P12838 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
DEFA4P12838 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
DEFA4P12838 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DEFA4P12838 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA4P12838 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC17.22■□□□□ 0.35
DEFA4P12838 GTSE1-AS1-202ENST00000623117 1518 ntBASIC17.22■□□□□ 0.35
DEFA4P12838 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA4P12838 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA4P12838 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA4P12838 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA4P12838 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.22■□□□□ 0.35
DEFA4P12838 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DEFA4P12838 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
DEFA4P12838 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA4P12838 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA4P12838 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
DEFA4P12838 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA4P12838 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA4P12838 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
DEFA4P12838 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
DEFA4P12838 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
DEFA4P12838 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA4P12838 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA4P12838 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC17.21■□□□□ 0.35
DEFA4P12838 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.21■□□□□ 0.35
DEFA4P12838 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA4P12838 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
DEFA4P12838 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA4P12838 DUX4L19-201ENST00000557448 1267 ntBASIC17.21■□□□□ 0.35
DEFA4P12838 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
DEFA4P12838 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.21■□□□□ 0.35
DEFA4P12838 RASSF1-AS1-201ENST00000629828 790 ntBASIC17.21■□□□□ 0.35
DEFA4P12838 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms