Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 MIR663A-201ENST00000385250 93 ntBASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 AL109923.1-201ENST00000618799 583 ntBASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 MYCNOS-205ENST00000641950 531 ntBASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 C9orf163-202ENST00000624034 2573 ntBASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB40ALP0C0E4 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 AC010141.2-201ENST00000452426 721 ntBASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 DUX4L16-201ENST00000555130 1264 ntBASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.11■□□□□ 0.81
RAB40ALP0C0E4 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.1■□□□□ 0.81
RAB40ALP0C0E4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 GPX1P1-201ENST00000388829 606 ntBASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 AC007322.1-201ENST00000426983 750 ntBASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
RAB40ALP0C0E4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.08■□□□□ 0.81
RAB40ALP0C0E4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
RAB40ALP0C0E4 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.08■□□□□ 0.81
RAB40ALP0C0E4 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.08■□□□□ 0.81
RAB40ALP0C0E4 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
RAB40ALP0C0E4 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.08■□□□□ 0.81
RAB40ALP0C0E4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40ALP0C0E4 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40ALP0C0E4 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40ALP0C0E4 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC20.08■□□□□ 0.8
RAB40ALP0C0E4 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40ALP0C0E4 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40ALP0C0E4 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
RAB40ALP0C0E4 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RAB40ALP0C0E4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms