Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC18.37■□□□□ 0.53
CSF1P09603 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CSF1P09603 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.37■□□□□ 0.53
CSF1P09603 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CSF1P09603 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
CSF1P09603 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSF1P09603 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
CSF1P09603 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSF1P09603 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC18.36■□□□□ 0.53
CSF1P09603 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CSF1P09603 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CSF1P09603 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSF1P09603 AL356740.2-201ENST00000601559 647 ntBASIC18.36■□□□□ 0.53
CSF1P09603 REST-206ENST00000612429 1376 ntTSL 5 BASIC18.36■□□□□ 0.53
CSF1P09603 MIR6724-1-201ENST00000616420 92 ntBASIC18.36■□□□□ 0.53
CSF1P09603 MIR6724-2-201ENST00000616483 92 ntBASIC18.36■□□□□ 0.53
CSF1P09603 REST-207ENST00000616975 1370 ntTSL 5 BASIC18.36■□□□□ 0.53
CSF1P09603 MIR6724-4-201ENST00000617390 92 ntBASIC18.36■□□□□ 0.53
CSF1P09603 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSF1P09603 MIR6724-3-201ENST00000622482 92 ntBASIC18.36■□□□□ 0.53
CSF1P09603 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CSF1P09603 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.36■□□□□ 0.53
CSF1P09603 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC18.35■□□□□ 0.53
CSF1P09603 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.35■□□□□ 0.53
CSF1P09603 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CSF1P09603 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC18.35■□□□□ 0.53
CSF1P09603 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.35■□□□□ 0.53
CSF1P09603 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CSF1P09603 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.35■□□□□ 0.53
CSF1P09603 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CSF1P09603 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.35■□□□□ 0.53
CSF1P09603 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.35■□□□□ 0.53
CSF1P09603 AL117332.1-201ENST00000622628 974 ntBASIC18.35■□□□□ 0.53
CSF1P09603 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CSF1P09603 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
CSF1P09603 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CSF1P09603 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
CSF1P09603 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC18.34■□□□□ 0.53
CSF1P09603 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC18.34■□□□□ 0.53
CSF1P09603 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CSF1P09603 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CSF1P09603 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.34■□□□□ 0.53
CSF1P09603 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CSF1P09603 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.33■□□□□ 0.53
CSF1P09603 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSF1P09603 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSF1P09603 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.33■□□□□ 0.53
CSF1P09603 CBWD5-207ENST00000382405 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CSF1P09603 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.33■□□□□ 0.52
CSF1P09603 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSF1P09603 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.33■□□□□ 0.52
CSF1P09603 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSF1P09603 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CSF1P09603 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSF1P09603 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CSF1P09603 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.33■□□□□ 0.52
CSF1P09603 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CSF1P09603 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.32■□□□□ 0.52
CSF1P09603 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSF1P09603 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CSF1P09603 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSF1P09603 LINC01006-201ENST00000333319 2292 ntBASIC18.32■□□□□ 0.52
CSF1P09603 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSF1P09603 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSF1P09603 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSF1P09603 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC18.32■□□□□ 0.52
CSF1P09603 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.32■□□□□ 0.52
CSF1P09603 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.32■□□□□ 0.52
CSF1P09603 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.32■□□□□ 0.52
CSF1P09603 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CSF1P09603 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CSF1P09603 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.32■□□□□ 0.52
CSF1P09603 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms