Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TPM3P06753 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TPM3P06753 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TPM3P06753 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC23.85■■□□□ 1.41
TPM3P06753 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
TPM3P06753 BX664725.1-201ENST00000438252 379 ntBASIC23.85■■□□□ 1.41
TPM3P06753 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.85■■□□□ 1.41
TPM3P06753 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC23.85■■□□□ 1.41
TPM3P06753 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC23.85■■□□□ 1.41
TPM3P06753 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC23.85■■□□□ 1.41
TPM3P06753 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC23.85■■□□□ 1.41
TPM3P06753 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
TPM3P06753 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TPM3P06753 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
TPM3P06753 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC23.85■■□□□ 1.41
TPM3P06753 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
TPM3P06753 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC23.84■■□□□ 1.41
TPM3P06753 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TPM3P06753 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TPM3P06753 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TPM3P06753 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TPM3P06753 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC23.84■■□□□ 1.41
TPM3P06753 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC23.84■■□□□ 1.41
TPM3P06753 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TPM3P06753 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
TPM3P06753 AC009102.2-201ENST00000606772 1639 ntBASIC23.84■■□□□ 1.41
TPM3P06753 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TPM3P06753 FEM1AP1-201ENST00000431297 1995 ntBASIC23.83■■□□□ 1.41
TPM3P06753 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
TPM3P06753 AC012354.3-201ENST00000623734 483 ntBASIC23.83■■□□□ 1.41
TPM3P06753 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TPM3P06753 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
TPM3P06753 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.83■■□□□ 1.4
TPM3P06753 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.4
TPM3P06753 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC23.82■■□□□ 1.4
TPM3P06753 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC23.82■■□□□ 1.4
TPM3P06753 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC23.82■■□□□ 1.4
TPM3P06753 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC23.82■■□□□ 1.4
TPM3P06753 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.82■■□□□ 1.4
TPM3P06753 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM3P06753 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TPM3P06753 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM3P06753 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TPM3P06753 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.82■■□□□ 1.4
TPM3P06753 CLTA-206ENST00000466396 695 ntTSL 2 BASIC23.82■■□□□ 1.4
TPM3P06753 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC23.82■■□□□ 1.4
TPM3P06753 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.82■■□□□ 1.4
TPM3P06753 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC23.82■■□□□ 1.4
TPM3P06753 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
TPM3P06753 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM3P06753 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
TPM3P06753 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
TPM3P06753 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
TPM3P06753 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
TPM3P06753 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.81■■□□□ 1.4
TPM3P06753 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TPM3P06753 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TPM3P06753 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TPM3P06753 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TPM3P06753 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
TPM3P06753 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TPM3P06753 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.8■■□□□ 1.4
TPM3P06753 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
TPM3P06753 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.8■■□□□ 1.4
TPM3P06753 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC23.8■■□□□ 1.4
TPM3P06753 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.8■■□□□ 1.4
TPM3P06753 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TPM3P06753 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM3P06753 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM3P06753 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM3P06753 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM3P06753 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC23.79■■□□□ 1.4
TPM3P06753 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM3P06753 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.79■■□□□ 1.4
TPM3P06753 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.79■■□□□ 1.4
TPM3P06753 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM3P06753 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
TPM3P06753 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
TPM3P06753 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM3P06753 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM3P06753 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
TPM3P06753 OXCT2P1-201ENST00000447263 1535 ntBASIC23.79■■□□□ 1.4
TPM3P06753 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC23.79■■□□□ 1.4
TPM3P06753 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
TPM3P06753 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TPM3P06753 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TPM3P06753 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
TPM3P06753 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC23.78■■□□□ 1.4
TPM3P06753 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.78■■□□□ 1.4
TPM3P06753 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms