Protein–RNA interactions for Protein: P06401

PGR, Progesterone receptor, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGRP06401 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.29■□□□□ 0.84
PGRP06401 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGRP06401 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.29■□□□□ 0.84
PGRP06401 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
PGRP06401 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
PGRP06401 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.29■□□□□ 0.84
PGRP06401 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PGRP06401 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGRP06401 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PGRP06401 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.28■□□□□ 0.84
PGRP06401 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGRP06401 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGRP06401 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.28■□□□□ 0.84
PGRP06401 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.28■□□□□ 0.84
PGRP06401 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC20.28■□□□□ 0.84
PGRP06401 AL034346.1-201ENST00000568244 1277 ntBASIC20.28■□□□□ 0.84
PGRP06401 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PGRP06401 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PGRP06401 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
PGRP06401 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.28■□□□□ 0.84
PGRP06401 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
PGRP06401 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGRP06401 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.27■□□□□ 0.84
PGRP06401 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGRP06401 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGRP06401 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.27■□□□□ 0.84
PGRP06401 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.27■□□□□ 0.84
PGRP06401 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGRP06401 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.27■□□□□ 0.84
PGRP06401 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGRP06401 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.27■□□□□ 0.84
PGRP06401 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGRP06401 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PGRP06401 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
PGRP06401 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PGRP06401 AL138724.1-201ENST00000606771 1088 ntBASIC20.27■□□□□ 0.84
PGRP06401 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.27■□□□□ 0.84
PGRP06401 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PGRP06401 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
PGRP06401 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGRP06401 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.27■□□□□ 0.84
PGRP06401 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGRP06401 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.27■□□□□ 0.84
PGRP06401 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PGRP06401 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PGRP06401 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGRP06401 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGRP06401 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGRP06401 SYT6-210ENST00000641643 1587 ntBASIC20.26■□□□□ 0.83
PGRP06401 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGRP06401 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.26■□□□□ 0.83
PGRP06401 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGRP06401 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGRP06401 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.26■□□□□ 0.83
PGRP06401 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PGRP06401 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
PGRP06401 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGRP06401 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PGRP06401 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PGRP06401 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGRP06401 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PGRP06401 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
PGRP06401 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PGRP06401 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PGRP06401 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.25■□□□□ 0.83
PGRP06401 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.25■□□□□ 0.83
PGRP06401 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGRP06401 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGRP06401 SERBP1P1-201ENST00000396021 1160 ntBASIC20.25■□□□□ 0.83
PGRP06401 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PGRP06401 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.25■□□□□ 0.83
PGRP06401 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGRP06401 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGRP06401 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGRP06401 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PGRP06401 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGRP06401 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PGRP06401 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGRP06401 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGRP06401 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PGRP06401 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PGRP06401 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.24■□□□□ 0.83
PGRP06401 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGRP06401 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGRP06401 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGRP06401 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.24■□□□□ 0.83
PGRP06401 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGRP06401 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.24■□□□□ 0.83
PGRP06401 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.24■□□□□ 0.83
PGRP06401 DUX4L19-201ENST00000557448 1267 ntBASIC20.24■□□□□ 0.83
PGRP06401 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.24■□□□□ 0.83
PGRP06401 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PGRP06401 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PGRP06401 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PGRP06401 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PGRP06401 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
PGRP06401 AC003102.1-202ENST00000563394 1796 ntBASIC20.23■□□□□ 0.83
PGRP06401 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PGRP06401 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.23■□□□□ 0.83
PGRP06401 AP004607.7-201ENST00000527152 1677 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms