Protein–RNA interactions for Protein: P05114

HMGN1, Non-histone chromosomal protein HMG-14, humanhuman

Predictions only

Length 100 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P05114 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGN1P05114 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGN1P05114 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGN1P05114 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGN1P05114 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGN1P05114 AC006455.2-201ENST00000429931 906 ntBASIC19.27■□□□□ 0.68
HMGN1P05114 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGN1P05114 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.27■□□□□ 0.68
HMGN1P05114 AC009299.2-201ENST00000482477 511 ntBASIC19.27■□□□□ 0.68
HMGN1P05114 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC19.27■□□□□ 0.68
HMGN1P05114 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.27■□□□□ 0.68
HMGN1P05114 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGN1P05114 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
HMGN1P05114 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGN1P05114 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGN1P05114 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
HMGN1P05114 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
HMGN1P05114 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.27■□□□□ 0.67
HMGN1P05114 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGN1P05114 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.27■□□□□ 0.67
HMGN1P05114 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
HMGN1P05114 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGN1P05114 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
HMGN1P05114 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
HMGN1P05114 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
HMGN1P05114 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
HMGN1P05114 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGN1P05114 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
HMGN1P05114 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
HMGN1P05114 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGN1P05114 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGN1P05114 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGN1P05114 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGN1P05114 OR2I1P-207ENST00000453522 948 ntBASIC19.26■□□□□ 0.67
HMGN1P05114 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC19.26■□□□□ 0.67
HMGN1P05114 AC010141.3-201ENST00000456659 717 ntBASIC19.26■□□□□ 0.67
HMGN1P05114 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
HMGN1P05114 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.26■□□□□ 0.67
HMGN1P05114 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGN1P05114 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGN1P05114 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
HMGN1P05114 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGN1P05114 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGN1P05114 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGN1P05114 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.25■□□□□ 0.67
HMGN1P05114 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGN1P05114 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGN1P05114 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGN1P05114 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
HMGN1P05114 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGN1P05114 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
HMGN1P05114 UNC93B8-201ENST00000511903 705 ntBASIC19.25■□□□□ 0.67
HMGN1P05114 AL034346.1-201ENST00000568244 1277 ntBASIC19.25■□□□□ 0.67
HMGN1P05114 AC099791.2-201ENST00000605725 427 ntBASIC19.25■□□□□ 0.67
HMGN1P05114 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.25■□□□□ 0.67
HMGN1P05114 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGN1P05114 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGN1P05114 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGN1P05114 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
HMGN1P05114 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
HMGN1P05114 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
HMGN1P05114 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGN1P05114 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGN1P05114 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.24■□□□□ 0.67
HMGN1P05114 RARRES2P1-201ENST00000474487 481 ntBASIC19.24■□□□□ 0.67
HMGN1P05114 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGN1P05114 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGN1P05114 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
HMGN1P05114 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.24■□□□□ 0.67
HMGN1P05114 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
HMGN1P05114 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.24■□□□□ 0.67
HMGN1P05114 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGN1P05114 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGN1P05114 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
HMGN1P05114 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGN1P05114 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGN1P05114 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGN1P05114 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGN1P05114 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HMGN1P05114 CREM-229ENST00000474362 1030 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGN1P05114 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC19.23■□□□□ 0.67
HMGN1P05114 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.23■□□□□ 0.67
HMGN1P05114 MIR3181-201ENST00000578512 73 ntBASIC19.23■□□□□ 0.67
HMGN1P05114 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
HMGN1P05114 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.23■□□□□ 0.67
HMGN1P05114 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
HMGN1P05114 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGN1P05114 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
HMGN1P05114 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGN1P05114 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
HMGN1P05114 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
HMGN1P05114 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGN1P05114 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGN1P05114 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
HMGN1P05114 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 GATM-206ENST00000558336 1522 ntTSL 2 BASIC19.22■□□□□ 0.67
HMGN1P05114 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
HMGN1P05114 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms