Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPB1P04440 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 C17orf82-201ENST00000623772 1530 ntBASIC19.1■□□□□ 0.65
HLA-DPB1P04440 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 QDPR-206ENST00000508623 601 ntTSL 3 BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 DUX4L4-201ENST00000566884 1269 ntBASIC19.1■□□□□ 0.65
HLA-DPB1P04440 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DPB1P04440 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPB1P04440 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DPB1P04440 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DPB1P04440 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
HLA-DPB1P04440 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DPB1P04440 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.08■□□□□ 0.65
HLA-DPB1P04440 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DPB1P04440 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 AC131281.2-201ENST00000520478 145 ntBASIC19.07■□□□□ 0.64
HLA-DPB1P04440 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 AL512631.2-201ENST00000604634 923 ntBASIC19.07■□□□□ 0.64
HLA-DPB1P04440 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.07■□□□□ 0.64
HLA-DPB1P04440 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 MIR4466-201ENST00000606121 54 ntBASIC19.06■□□□□ 0.64
HLA-DPB1P04440 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
HLA-DPB1P04440 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HLA-DPB1P04440 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms