Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
MT-ND3P03897 SYT6-210ENST00000641643 1587 ntBASIC21.65■■□□□ 1.06
MT-ND3P03897 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
MT-ND3P03897 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MT-ND3P03897 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
MT-ND3P03897 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MT-ND3P03897 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
MT-ND3P03897 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.06
MT-ND3P03897 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
MT-ND3P03897 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MT-ND3P03897 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.64■■□□□ 1.05
MT-ND3P03897 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC21.64■■□□□ 1.05
MT-ND3P03897 SUDS3P1-201ENST00000505831 966 ntBASIC21.64■■□□□ 1.05
MT-ND3P03897 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC21.64■■□□□ 1.05
MT-ND3P03897 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
MT-ND3P03897 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
MT-ND3P03897 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
MT-ND3P03897 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.64■■□□□ 1.05
MT-ND3P03897 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
MT-ND3P03897 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
MT-ND3P03897 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.63■■□□□ 1.05
MT-ND3P03897 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
MT-ND3P03897 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MT-ND3P03897 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.63■■□□□ 1.05
MT-ND3P03897 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MT-ND3P03897 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC21.63■■□□□ 1.05
MT-ND3P03897 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.63■■□□□ 1.05
MT-ND3P03897 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
MT-ND3P03897 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC21.63■■□□□ 1.05
MT-ND3P03897 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
MT-ND3P03897 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MT-ND3P03897 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.62■■□□□ 1.05
MT-ND3P03897 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-ND3P03897 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-ND3P03897 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-ND3P03897 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.62■■□□□ 1.05
MT-ND3P03897 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-ND3P03897 FEM1AP4-201ENST00000443167 1987 ntBASIC21.62■■□□□ 1.05
MT-ND3P03897 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
MT-ND3P03897 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC21.62■■□□□ 1.05
MT-ND3P03897 AL031432.3-201ENST00000607698 485 ntBASIC21.62■■□□□ 1.05
MT-ND3P03897 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-ND3P03897 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MT-ND3P03897 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC21.62■■□□□ 1.05
MT-ND3P03897 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-ND3P03897 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
MT-ND3P03897 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC21.62■■□□□ 1.05
MT-ND3P03897 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
MT-ND3P03897 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
MT-ND3P03897 VGF-203ENST00000611537 1622 ntTSL 5 BASIC21.62■■□□□ 1.05
MT-ND3P03897 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
MT-ND3P03897 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 C17orf82-201ENST00000623772 1530 ntBASIC21.61■■□□□ 1.05
MT-ND3P03897 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC21.61■■□□□ 1.05
MT-ND3P03897 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
MT-ND3P03897 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC21.61■■□□□ 1.05
MT-ND3P03897 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 AF106564.1-201ENST00000607058 2553 ntBASIC21.61■■□□□ 1.05
MT-ND3P03897 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
MT-ND3P03897 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
MT-ND3P03897 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND3P03897 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND3P03897 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND3P03897 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC21.6■■□□□ 1.05
MT-ND3P03897 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.6■■□□□ 1.05
MT-ND3P03897 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.6■■□□□ 1.05
MT-ND3P03897 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
MT-ND3P03897 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND3P03897 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND3P03897 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
MT-ND3P03897 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.6■■□□□ 1.05
MT-ND3P03897 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.6■■□□□ 1.05
MT-ND3P03897 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND3P03897 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.6■■□□□ 1.05
MT-ND3P03897 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
MT-ND3P03897 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
MT-ND3P03897 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
MT-ND3P03897 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND3P03897 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
MT-ND3P03897 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND3P03897 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND3P03897 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND3P03897 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND3P03897 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.59■■□□□ 1.05
MT-ND3P03897 AL499627.2-201ENST00000606283 725 ntBASIC21.59■■□□□ 1.05
MT-ND3P03897 AL138724.1-201ENST00000606771 1088 ntBASIC21.59■■□□□ 1.05
MT-ND3P03897 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.59■■□□□ 1.05
MT-ND3P03897 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
MT-ND3P03897 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND3P03897 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
MT-ND3P03897 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms