Protein–RNA interactions for Protein: O95197

RTN3, Reticulon-3, humanhuman

Predicted RBP Predictions only

Length 1,032 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3O95197 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC22.48■■□□□ 1.19
RTN3O95197 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTN3O95197 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
RTN3O95197 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
RTN3O95197 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTN3O95197 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
RTN3O95197 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.47■■□□□ 1.19
RTN3O95197 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTN3O95197 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
RTN3O95197 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
RTN3O95197 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.47■■□□□ 1.19
RTN3O95197 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTN3O95197 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC22.46■■□□□ 1.19
RTN3O95197 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.46■■□□□ 1.19
RTN3O95197 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTN3O95197 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC22.46■■□□□ 1.19
RTN3O95197 AC004911.1-201ENST00000416316 871 ntBASIC22.46■■□□□ 1.19
RTN3O95197 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.46■■□□□ 1.19
RTN3O95197 AC006015.1-201ENST00000429970 570 ntBASIC22.46■■□□□ 1.19
RTN3O95197 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTN3O95197 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC22.46■■□□□ 1.19
RTN3O95197 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTN3O95197 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTN3O95197 AL121603.2-201ENST00000557373 2117 ntBASIC22.46■■□□□ 1.19
RTN3O95197 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RTN3O95197 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RTN3O95197 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC22.45■■□□□ 1.19
RTN3O95197 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTN3O95197 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTN3O95197 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTN3O95197 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTN3O95197 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.45■■□□□ 1.18
RTN3O95197 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC22.45■■□□□ 1.18
RTN3O95197 AC104187.1-201ENST00000607510 612 ntBASIC22.45■■□□□ 1.18
RTN3O95197 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTN3O95197 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTN3O95197 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC22.45■■□□□ 1.18
RTN3O95197 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTN3O95197 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTN3O95197 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RTN3O95197 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RTN3O95197 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTN3O95197 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RTN3O95197 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RTN3O95197 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC22.44■■□□□ 1.18
RTN3O95197 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC22.44■■□□□ 1.18
RTN3O95197 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.44■■□□□ 1.18
RTN3O95197 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC22.44■■□□□ 1.18
RTN3O95197 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.44■■□□□ 1.18
RTN3O95197 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC22.44■■□□□ 1.18
RTN3O95197 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RTN3O95197 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC22.44■■□□□ 1.18
RTN3O95197 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RTN3O95197 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTN3O95197 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTN3O95197 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTN3O95197 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.43■■□□□ 1.18
RTN3O95197 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
RTN3O95197 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC22.43■■□□□ 1.18
RTN3O95197 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.43■■□□□ 1.18
RTN3O95197 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RTN3O95197 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RTN3O95197 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTN3O95197 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC22.43■■□□□ 1.18
RTN3O95197 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.43■■□□□ 1.18
RTN3O95197 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.43■■□□□ 1.18
RTN3O95197 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RTN3O95197 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC22.43■■□□□ 1.18
RTN3O95197 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC22.43■■□□□ 1.18
RTN3O95197 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.43■■□□□ 1.18
RTN3O95197 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.42■■□□□ 1.18
RTN3O95197 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTN3O95197 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC22.42■■□□□ 1.18
RTN3O95197 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC22.42■■□□□ 1.18
RTN3O95197 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC22.42■■□□□ 1.18
RTN3O95197 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC22.42■■□□□ 1.18
RTN3O95197 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTN3O95197 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RTN3O95197 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RTN3O95197 KRT18P11-201ENST00000435214 1283 ntBASIC22.42■■□□□ 1.18
RTN3O95197 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.42■■□□□ 1.18
RTN3O95197 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.42■■□□□ 1.18
RTN3O95197 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTN3O95197 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTN3O95197 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTN3O95197 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTN3O95197 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC22.42■■□□□ 1.18
RTN3O95197 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RTN3O95197 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTN3O95197 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RTN3O95197 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC22.41■■□□□ 1.18
RTN3O95197 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTN3O95197 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC22.41■■□□□ 1.18
RTN3O95197 GAS2L1P2-201ENST00000436355 1356 ntBASIC22.41■■□□□ 1.18
RTN3O95197 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RTN3O95197 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RTN3O95197 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RTN3O95197 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC22.41■■□□□ 1.18
RTN3O95197 DLX3-202ENST00000512495 834 ntTSL 2 BASIC22.41■■□□□ 1.18
RTN3O95197 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms