Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
RFPL1O75677 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RFPL1O75677 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
RFPL1O75677 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFPL1O75677 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFPL1O75677 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
RFPL1O75677 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
RFPL1O75677 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.42■■□□□ 1.02
RFPL1O75677 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
RFPL1O75677 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC21.42■■□□□ 1.02
RFPL1O75677 AC092171.4-201ENST00000609130 632 ntBASIC21.42■■□□□ 1.02
RFPL1O75677 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.41■■□□□ 1.02
RFPL1O75677 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
RFPL1O75677 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
RFPL1O75677 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.41■■□□□ 1.02
RFPL1O75677 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFPL1O75677 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFPL1O75677 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RFPL1O75677 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFPL1O75677 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFPL1O75677 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC21.41■■□□□ 1.02
RFPL1O75677 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC21.41■■□□□ 1.02
RFPL1O75677 SF1-220ENST00000626028 704 ntTSL 2 BASIC21.41■■□□□ 1.02
RFPL1O75677 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
RFPL1O75677 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.41■■□□□ 1.02
RFPL1O75677 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RFPL1O75677 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
RFPL1O75677 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
RFPL1O75677 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RFPL1O75677 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
RFPL1O75677 AC073130.3-201ENST00000624389 2278 ntBASIC21.4■■□□□ 1.02
RFPL1O75677 OR7E47P-201ENST00000546390 1422 ntBASIC21.4■■□□□ 1.02
RFPL1O75677 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.4■■□□□ 1.02
RFPL1O75677 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFPL1O75677 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.4■■□□□ 1.02
RFPL1O75677 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFPL1O75677 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC21.4■■□□□ 1.02
RFPL1O75677 pRNA.6-201ENST00000610482 90 ntBASIC21.4■■□□□ 1.02
RFPL1O75677 pRNA.5-201ENST00000612139 90 ntBASIC21.4■■□□□ 1.02
RFPL1O75677 pRNA.11-201ENST00000618423 90 ntBASIC21.4■■□□□ 1.02
RFPL1O75677 pRNA.13-201ENST00000619112 90 ntBASIC21.4■■□□□ 1.02
RFPL1O75677 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFPL1O75677 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.4■■□□□ 1.02
RFPL1O75677 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.4■■□□□ 1.02
RFPL1O75677 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC21.4■■□□□ 1.02
RFPL1O75677 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFPL1O75677 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFPL1O75677 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
RFPL1O75677 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
RFPL1O75677 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC21.39■■□□□ 1.02
RFPL1O75677 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.39■■□□□ 1.02
RFPL1O75677 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
RFPL1O75677 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFPL1O75677 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFPL1O75677 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC21.39■■□□□ 1.01
RFPL1O75677 AL136967.2-201ENST00000623968 743 ntBASIC21.39■■□□□ 1.01
RFPL1O75677 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFPL1O75677 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.39■■□□□ 1.01
RFPL1O75677 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFPL1O75677 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFPL1O75677 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFPL1O75677 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFPL1O75677 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFPL1O75677 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFPL1O75677 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
RFPL1O75677 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC21.38■■□□□ 1.01
RFPL1O75677 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.38■■□□□ 1.01
RFPL1O75677 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
RFPL1O75677 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.38■■□□□ 1.01
RFPL1O75677 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFPL1O75677 MIR939-201ENST00000401314 82 ntBASIC21.38■■□□□ 1.01
RFPL1O75677 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC21.38■■□□□ 1.01
RFPL1O75677 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC21.38■■□□□ 1.01
RFPL1O75677 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC21.38■■□□□ 1.01
RFPL1O75677 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.38■■□□□ 1.01
RFPL1O75677 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC21.38■■□□□ 1.01
RFPL1O75677 SYT6-210ENST00000641643 1587 ntBASIC21.38■■□□□ 1.01
RFPL1O75677 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFPL1O75677 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.38■■□□□ 1.01
RFPL1O75677 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.38■■□□□ 1.01
RFPL1O75677 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFPL1O75677 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFPL1O75677 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
RFPL1O75677 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFPL1O75677 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFPL1O75677 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFPL1O75677 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFPL1O75677 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFPL1O75677 AP001330.3-201ENST00000520123 633 ntBASIC21.37■■□□□ 1.01
RFPL1O75677 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFPL1O75677 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
RFPL1O75677 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.37■■□□□ 1.01
RFPL1O75677 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFPL1O75677 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
RFPL1O75677 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFPL1O75677 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFPL1O75677 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
RFPL1O75677 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFPL1O75677 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.36■■□□□ 1.01
RFPL1O75677 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms