Protein–RNA interactions for Protein: O75473

LGR5, Leucine-rich repeat-containing G-protein coupled receptor 5, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5O75473 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.81■■□□□ 1.4
LGR5O75473 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LGR5O75473 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC23.81■■□□□ 1.4
LGR5O75473 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC23.81■■□□□ 1.4
LGR5O75473 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
LGR5O75473 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.81■■□□□ 1.4
LGR5O75473 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
LGR5O75473 AC127496.7-201ENST00000625110 1798 ntBASIC23.8■■□□□ 1.4
LGR5O75473 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.8■■□□□ 1.4
LGR5O75473 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
LGR5O75473 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC23.8■■□□□ 1.4
LGR5O75473 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC23.8■■□□□ 1.4
LGR5O75473 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LGR5O75473 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LGR5O75473 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC23.8■■□□□ 1.4
LGR5O75473 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
LGR5O75473 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC23.8■■□□□ 1.4
LGR5O75473 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
LGR5O75473 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LGR5O75473 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LGR5O75473 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
LGR5O75473 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
LGR5O75473 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
LGR5O75473 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
LGR5O75473 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC23.79■■□□□ 1.4
LGR5O75473 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LGR5O75473 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LGR5O75473 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
LGR5O75473 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
LGR5O75473 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LGR5O75473 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC23.79■■□□□ 1.4
LGR5O75473 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LGR5O75473 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
LGR5O75473 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC23.79■■□□□ 1.4
LGR5O75473 C1orf229-201ENST00000623686 2258 ntBASIC23.79■■□□□ 1.4
LGR5O75473 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LGR5O75473 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LGR5O75473 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LGR5O75473 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LGR5O75473 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LGR5O75473 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LGR5O75473 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC23.78■■□□□ 1.4
LGR5O75473 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC23.78■■□□□ 1.4
LGR5O75473 BRI3-207ENST00000539286 699 ntTSL 2 BASIC23.78■■□□□ 1.4
LGR5O75473 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
LGR5O75473 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
LGR5O75473 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
LGR5O75473 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
LGR5O75473 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
LGR5O75473 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.78■■□□□ 1.4
LGR5O75473 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LGR5O75473 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LGR5O75473 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
LGR5O75473 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC23.77■■□□□ 1.4
LGR5O75473 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.77■■□□□ 1.4
LGR5O75473 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
LGR5O75473 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
LGR5O75473 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
LGR5O75473 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
LGR5O75473 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
LGR5O75473 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LGR5O75473 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LGR5O75473 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.76■■□□□ 1.39
LGR5O75473 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LGR5O75473 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LGR5O75473 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.76■■□□□ 1.39
LGR5O75473 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
LGR5O75473 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC23.76■■□□□ 1.39
LGR5O75473 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.76■■□□□ 1.39
LGR5O75473 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
LGR5O75473 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LGR5O75473 SLC7A5P1-201ENST00000568957 537 ntBASIC23.76■■□□□ 1.39
LGR5O75473 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
LGR5O75473 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC23.76■■□□□ 1.39
LGR5O75473 AC231657.2-201ENST00000624556 255 ntBASIC23.76■■□□□ 1.39
LGR5O75473 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC23.76■■□□□ 1.39
LGR5O75473 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
LGR5O75473 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
LGR5O75473 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LGR5O75473 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
LGR5O75473 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
LGR5O75473 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
LGR5O75473 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
LGR5O75473 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
LGR5O75473 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC23.75■■□□□ 1.39
LGR5O75473 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.75■■□□□ 1.39
LGR5O75473 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.75■■□□□ 1.39
LGR5O75473 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC23.75■■□□□ 1.39
LGR5O75473 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC23.75■■□□□ 1.39
LGR5O75473 MAZ-216ENST00000616501 991 ntTSL 5 BASIC23.75■■□□□ 1.39
LGR5O75473 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
LGR5O75473 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
LGR5O75473 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC23.75■■□□□ 1.39
LGR5O75473 C9orf163-202ENST00000624034 2573 ntBASIC23.75■■□□□ 1.39
LGR5O75473 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC23.75■■□□□ 1.39
LGR5O75473 AC080038.3-201ENST00000623346 1952 ntBASIC23.74■■□□□ 1.39
LGR5O75473 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
LGR5O75473 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
LGR5O75473 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
LGR5O75473 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms