Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
KDELR3O43731 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.73■■□□□ 1.07
KDELR3O43731 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDELR3O43731 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDELR3O43731 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
KDELR3O43731 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDELR3O43731 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
KDELR3O43731 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDELR3O43731 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDELR3O43731 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC21.73■■□□□ 1.07
KDELR3O43731 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC21.73■■□□□ 1.07
KDELR3O43731 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC21.73■■□□□ 1.07
KDELR3O43731 AC003102.1-202ENST00000563394 1796 ntBASIC21.73■■□□□ 1.07
KDELR3O43731 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
KDELR3O43731 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
KDELR3O43731 AC004854.2-201ENST00000608450 1441 ntBASIC21.72■■□□□ 1.07
KDELR3O43731 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDELR3O43731 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDELR3O43731 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.72■■□□□ 1.07
KDELR3O43731 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
KDELR3O43731 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC21.72■■□□□ 1.07
KDELR3O43731 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDELR3O43731 KRT18P61-201ENST00000585825 1298 ntBASIC21.72■■□□□ 1.07
KDELR3O43731 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC21.72■■□□□ 1.07
KDELR3O43731 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
KDELR3O43731 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.72■■□□□ 1.07
KDELR3O43731 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
KDELR3O43731 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
KDELR3O43731 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC21.71■■□□□ 1.07
KDELR3O43731 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC21.71■■□□□ 1.07
KDELR3O43731 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC21.71■■□□□ 1.07
KDELR3O43731 GALNS-213ENST00000569433 723 ntTSL 3 BASIC21.71■■□□□ 1.07
KDELR3O43731 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDELR3O43731 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDELR3O43731 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDELR3O43731 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.71■■□□□ 1.07
KDELR3O43731 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDELR3O43731 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDELR3O43731 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDELR3O43731 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC21.71■■□□□ 1.07
KDELR3O43731 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
KDELR3O43731 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
KDELR3O43731 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDELR3O43731 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDELR3O43731 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDELR3O43731 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDELR3O43731 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
KDELR3O43731 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
KDELR3O43731 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC21.7■■□□□ 1.06
KDELR3O43731 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.7■■□□□ 1.06
KDELR3O43731 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
KDELR3O43731 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDELR3O43731 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC21.7■■□□□ 1.06
KDELR3O43731 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
KDELR3O43731 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
KDELR3O43731 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.69■■□□□ 1.06
KDELR3O43731 AC010542.4-201ENST00000563151 1910 ntBASIC21.69■■□□□ 1.06
KDELR3O43731 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDELR3O43731 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC21.69■■□□□ 1.06
KDELR3O43731 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDELR3O43731 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.69■■□□□ 1.06
KDELR3O43731 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.69■■□□□ 1.06
KDELR3O43731 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDELR3O43731 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC21.69■■□□□ 1.06
KDELR3O43731 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
KDELR3O43731 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
KDELR3O43731 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
KDELR3O43731 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC21.68■■□□□ 1.06
KDELR3O43731 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21.68■■□□□ 1.06
KDELR3O43731 EEF1DP3-203ENST00000566025 782 ntBASIC21.68■■□□□ 1.06
KDELR3O43731 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC21.68■■□□□ 1.06
KDELR3O43731 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
KDELR3O43731 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
KDELR3O43731 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDELR3O43731 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KDELR3O43731 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
KDELR3O43731 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDELR3O43731 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDELR3O43731 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.67■■□□□ 1.06
KDELR3O43731 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
KDELR3O43731 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
KDELR3O43731 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.67■■□□□ 1.06
KDELR3O43731 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
KDELR3O43731 AC053503.5-201ENST00000601508 636 ntBASIC21.67■■□□□ 1.06
KDELR3O43731 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.67■■□□□ 1.06
KDELR3O43731 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
KDELR3O43731 PARL-206ENST00000435888 1098 ntTSL 5 BASIC21.66■■□□□ 1.06
KDELR3O43731 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC21.66■■□□□ 1.06
KDELR3O43731 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC21.66■■□□□ 1.06
KDELR3O43731 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms