Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC21.68■■□□□ 1.06
RIPK2O43353 AL451085.2-201ENST00000605085 799 ntBASIC21.68■■□□□ 1.06
RIPK2O43353 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.68■■□□□ 1.06
RIPK2O43353 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK2O43353 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
RIPK2O43353 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
RIPK2O43353 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK2O43353 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK2O43353 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
RIPK2O43353 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC21.68■■□□□ 1.06
RIPK2O43353 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.67■■□□□ 1.06
RIPK2O43353 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.67■■□□□ 1.06
RIPK2O43353 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RIPK2O43353 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RIPK2O43353 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RIPK2O43353 AC133637.1-201ENST00000624115 1537 ntBASIC21.67■■□□□ 1.06
RIPK2O43353 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.67■■□□□ 1.06
RIPK2O43353 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
RIPK2O43353 EXOG-217ENST00000630638 197 ntTSL 5 BASIC21.67■■□□□ 1.06
RIPK2O43353 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RIPK2O43353 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
RIPK2O43353 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.66■■□□□ 1.06
RIPK2O43353 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIPK2O43353 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIPK2O43353 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIPK2O43353 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RIPK2O43353 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.66■■□□□ 1.06
RIPK2O43353 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIPK2O43353 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RIPK2O43353 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIPK2O43353 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RIPK2O43353 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC21.66■■□□□ 1.06
RIPK2O43353 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.66■■□□□ 1.06
RIPK2O43353 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
RIPK2O43353 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
RIPK2O43353 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.66■■□□□ 1.06
RIPK2O43353 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
RIPK2O43353 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
RIPK2O43353 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.65■■□□□ 1.06
RIPK2O43353 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK2O43353 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
RIPK2O43353 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.65■■□□□ 1.06
RIPK2O43353 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.65■■□□□ 1.06
RIPK2O43353 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK2O43353 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK2O43353 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK2O43353 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK2O43353 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK2O43353 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RIPK2O43353 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.65■■□□□ 1.06
RIPK2O43353 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
RIPK2O43353 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
RIPK2O43353 STX4-202ENST00000394998 1498 ntTSL 2 BASIC21.64■■□□□ 1.06
RIPK2O43353 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.64■■□□□ 1.06
RIPK2O43353 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RIPK2O43353 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
RIPK2O43353 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RIPK2O43353 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.64■■□□□ 1.06
RIPK2O43353 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
RIPK2O43353 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RIPK2O43353 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
RIPK2O43353 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RIPK2O43353 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK2O43353 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK2O43353 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.64■■□□□ 1.05
RIPK2O43353 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.64■■□□□ 1.05
RIPK2O43353 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
RIPK2O43353 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK2O43353 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
RIPK2O43353 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC21.64■■□□□ 1.05
RIPK2O43353 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC21.64■■□□□ 1.05
RIPK2O43353 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.64■■□□□ 1.05
RIPK2O43353 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
RIPK2O43353 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.64■■□□□ 1.05
RIPK2O43353 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK2O43353 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RIPK2O43353 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK2O43353 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK2O43353 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK2O43353 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK2O43353 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK2O43353 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK2O43353 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC21.63■■□□□ 1.05
RIPK2O43353 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC21.63■■□□□ 1.05
RIPK2O43353 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK2O43353 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC21.63■■□□□ 1.05
RIPK2O43353 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC21.63■■□□□ 1.05
RIPK2O43353 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
RIPK2O43353 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
RIPK2O43353 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK2O43353 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK2O43353 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK2O43353 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC21.62■■□□□ 1.05
RIPK2O43353 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK2O43353 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK2O43353 Z92544.1-202ENST00000571933 1220 ntBASIC21.62■■□□□ 1.05
RIPK2O43353 AC010997.5-201ENST00000609182 354 ntBASIC21.62■■□□□ 1.05
RIPK2O43353 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK2O43353 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
RIPK2O43353 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms