Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PAX4O43316 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC15.18■□□□□ 0.02
PAX4O43316 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PAX4O43316 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
PAX4O43316 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC15.18■□□□□ 0.02
PAX4O43316 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC15.18■□□□□ 0.02
PAX4O43316 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC15.18■□□□□ 0.02
PAX4O43316 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC15.18■□□□□ 0.02
PAX4O43316 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PAX4O43316 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
PAX4O43316 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC15.17■□□□□ 0.02
PAX4O43316 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
PAX4O43316 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC15.17■□□□□ 0.02
PAX4O43316 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC15.17■□□□□ 0.02
PAX4O43316 LHPP-203ENST00000392757 840 ntTSL 3 BASIC15.17■□□□□ 0.02
PAX4O43316 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
PAX4O43316 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC15.17■□□□□ 0.02
PAX4O43316 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC15.17■□□□□ 0.02
PAX4O43316 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 STK25-234ENST00000535007 2459 ntTSL 2 BASIC15.17■□□□□ 0.02
PAX4O43316 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
PAX4O43316 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
PAX4O43316 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PAX4O43316 LINC00526-201ENST00000581067 1875 ntBASIC15.16■□□□□ 0.02
PAX4O43316 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC15.16■□□□□ 0.02
PAX4O43316 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
PAX4O43316 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PAX4O43316 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC15.16■□□□□ 0.02
PAX4O43316 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
PAX4O43316 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PAX4O43316 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PAX4O43316 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC15.16■□□□□ 0.02
PAX4O43316 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC15.16■□□□□ 0.02
PAX4O43316 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
PAX4O43316 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
PAX4O43316 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC15.16■□□□□ 0.02
PAX4O43316 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
PAX4O43316 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC15.16■□□□□ 0.02
PAX4O43316 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC15.16■□□□□ 0.02
PAX4O43316 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
PAX4O43316 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC15.15■□□□□ 0.02
PAX4O43316 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
PAX4O43316 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
PAX4O43316 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC15.15■□□□□ 0.02
PAX4O43316 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC15.15■□□□□ 0.02
PAX4O43316 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC15.15■□□□□ 0.02
PAX4O43316 AL034346.1-201ENST00000568244 1277 ntBASIC15.15■□□□□ 0.02
PAX4O43316 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
PAX4O43316 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.15■□□□□ 0.02
PAX4O43316 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 AC105233.4-201ENST00000642045 216 ntBASIC15.15■□□□□ 0.02
PAX4O43316 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.15■□□□□ 0.02
PAX4O43316 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.15■□□□□ 0.02
PAX4O43316 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC15.15■□□□□ 0.02
PAX4O43316 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC15.15■□□□□ 0.02
PAX4O43316 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC15.15■□□□□ 0.02
PAX4O43316 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
PAX4O43316 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
PAX4O43316 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
PAX4O43316 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
PAX4O43316 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
PAX4O43316 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms