Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.54■□□□□ 0.88
GSC2O15499 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.54■□□□□ 0.88
GSC2O15499 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.53■□□□□ 0.88
GSC2O15499 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
GSC2O15499 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
GSC2O15499 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.53■□□□□ 0.88
GSC2O15499 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.53■□□□□ 0.88
GSC2O15499 AC019171.1-201ENST00000601251 1056 ntBASIC20.53■□□□□ 0.88
GSC2O15499 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GSC2O15499 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
GSC2O15499 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.53■□□□□ 0.88
GSC2O15499 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
GSC2O15499 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
GSC2O15499 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
GSC2O15499 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.53■□□□□ 0.88
GSC2O15499 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
GSC2O15499 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GSC2O15499 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GSC2O15499 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
GSC2O15499 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
GSC2O15499 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
GSC2O15499 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.52■□□□□ 0.88
GSC2O15499 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
GSC2O15499 MIR4281-201ENST00000580852 62 ntBASIC20.52■□□□□ 0.88
GSC2O15499 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
GSC2O15499 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
GSC2O15499 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.52■□□□□ 0.87
GSC2O15499 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.52■□□□□ 0.87
GSC2O15499 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
GSC2O15499 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GSC2O15499 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
GSC2O15499 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC20.51■□□□□ 0.87
GSC2O15499 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.51■□□□□ 0.87
GSC2O15499 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC20.51■□□□□ 0.87
GSC2O15499 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
GSC2O15499 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
GSC2O15499 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC20.51■□□□□ 0.87
GSC2O15499 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
GSC2O15499 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GSC2O15499 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GSC2O15499 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GSC2O15499 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.5■□□□□ 0.87
GSC2O15499 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GSC2O15499 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
GSC2O15499 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GSC2O15499 THA1P-201ENST00000590384 1145 ntBASIC20.5■□□□□ 0.87
GSC2O15499 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GSC2O15499 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
GSC2O15499 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.5■□□□□ 0.87
GSC2O15499 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.5■□□□□ 0.87
GSC2O15499 AC087289.5-201ENST00000586076 3175 ntBASIC20.5■□□□□ 0.87
GSC2O15499 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
GSC2O15499 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GSC2O15499 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
GSC2O15499 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
GSC2O15499 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GSC2O15499 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
GSC2O15499 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
GSC2O15499 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.49■□□□□ 0.87
GSC2O15499 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GSC2O15499 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.49■□□□□ 0.87
GSC2O15499 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GSC2O15499 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GSC2O15499 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
GSC2O15499 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GSC2O15499 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.49■□□□□ 0.87
GSC2O15499 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.49■□□□□ 0.87
GSC2O15499 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
GSC2O15499 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
GSC2O15499 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GSC2O15499 AL020996.1-203ENST00000536896 2307 ntBASIC20.48■□□□□ 0.87
GSC2O15499 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GSC2O15499 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
GSC2O15499 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
GSC2O15499 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
GSC2O15499 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC20.48■□□□□ 0.87
GSC2O15499 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
GSC2O15499 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
GSC2O15499 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.48■□□□□ 0.87
GSC2O15499 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
GSC2O15499 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC20.48■□□□□ 0.87
GSC2O15499 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
GSC2O15499 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
GSC2O15499 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.47■□□□□ 0.87
GSC2O15499 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms