Protein–RNA interactions for Protein: O15266

SHOX, Short stature homeobox protein, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOXO15266 RNF146-205ENST00000477776 762 ntTSL 3 BASIC18.13■□□□□ 0.49
SHOXO15266 PRTG-204ENST00000561292 833 ntTSL 3 BASIC18.13■□□□□ 0.49
SHOXO15266 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC18.13■□□□□ 0.49
SHOXO15266 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHOXO15266 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHOXO15266 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHOXO15266 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SHOXO15266 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHOXO15266 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
SHOXO15266 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SHOXO15266 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SHOXO15266 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC18.13■□□□□ 0.49
SHOXO15266 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SHOXO15266 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SHOXO15266 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SHOXO15266 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SHOXO15266 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHOXO15266 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHOXO15266 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC18.12■□□□□ 0.49
SHOXO15266 CLTA-210ENST00000540080 989 ntTSL 2 BASIC18.12■□□□□ 0.49
SHOXO15266 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SHOXO15266 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHOXO15266 AC021242.3-201ENST00000607598 1377 ntBASIC18.12■□□□□ 0.49
SHOXO15266 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
SHOXO15266 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHOXO15266 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC18.12■□□□□ 0.49
SHOXO15266 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SHOXO15266 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC18.11■□□□□ 0.49
SHOXO15266 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC18.11■□□□□ 0.49
SHOXO15266 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC18.11■□□□□ 0.49
SHOXO15266 KRT125P-201ENST00000546827 989 ntBASIC18.11■□□□□ 0.49
SHOXO15266 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SHOXO15266 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 GCA-201ENST00000233612 1694 ntTSL 2 BASIC18.11■□□□□ 0.49
SHOXO15266 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SHOXO15266 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC18.11■□□□□ 0.49
SHOXO15266 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.11■□□□□ 0.49
SHOXO15266 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SHOXO15266 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.11■□□□□ 0.49
SHOXO15266 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SHOXO15266 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SHOXO15266 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHOXO15266 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHOXO15266 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHOXO15266 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHOXO15266 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHOXO15266 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHOXO15266 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SHOXO15266 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHOXO15266 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.1■□□□□ 0.49
SHOXO15266 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SHOXO15266 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHOXO15266 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SHOXO15266 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SHOXO15266 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 AC005703.6-201ENST00000623265 1329 ntBASIC18.09■□□□□ 0.49
SHOXO15266 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SHOXO15266 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SHOXO15266 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 MIR6722-201ENST00000617286 78 ntBASIC18.09■□□□□ 0.49
SHOXO15266 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
SHOXO15266 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SHOXO15266 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SHOXO15266 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.09■□□□□ 0.49
SHOXO15266 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.09■□□□□ 0.49
SHOXO15266 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC18.09■□□□□ 0.49
SHOXO15266 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SHOXO15266 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SHOXO15266 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SHOXO15266 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SHOXO15266 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.49
SHOXO15266 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.08■□□□□ 0.49
SHOXO15266 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHOXO15266 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.08■□□□□ 0.49
SHOXO15266 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHOXO15266 AC080038.3-201ENST00000623346 1952 ntBASIC18.08■□□□□ 0.49
SHOXO15266 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SHOXO15266 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.08■□□□□ 0.49
SHOXO15266 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC18.08■□□□□ 0.49
SHOXO15266 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms