Protein–RNA interactions for Protein: O15232

MATN3, Matrilin-3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3O15232 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.76■■□□□ 1.07
MATN3O15232 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MATN3O15232 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.76■■□□□ 1.07
MATN3O15232 AC104564.3-201ENST00000582367 638 ntBASIC21.76■■□□□ 1.07
MATN3O15232 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
MATN3O15232 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
MATN3O15232 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC21.75■■□□□ 1.07
MATN3O15232 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MATN3O15232 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.75■■□□□ 1.07
MATN3O15232 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.75■■□□□ 1.07
MATN3O15232 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MATN3O15232 AC027612.3-201ENST00000413684 1047 ntBASIC21.75■■□□□ 1.07
MATN3O15232 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.75■■□□□ 1.07
MATN3O15232 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
MATN3O15232 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MATN3O15232 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
MATN3O15232 AC244015.2-201ENST00000616358 1861 ntBASIC21.75■■□□□ 1.07
MATN3O15232 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC21.74■■□□□ 1.07
MATN3O15232 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.74■■□□□ 1.07
MATN3O15232 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.74■■□□□ 1.07
MATN3O15232 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC21.74■■□□□ 1.07
MATN3O15232 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
MATN3O15232 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MATN3O15232 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MATN3O15232 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC21.73■■□□□ 1.07
MATN3O15232 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MATN3O15232 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MATN3O15232 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
MATN3O15232 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MATN3O15232 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
MATN3O15232 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC21.73■■□□□ 1.07
MATN3O15232 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.73■■□□□ 1.07
MATN3O15232 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
MATN3O15232 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.73■■□□□ 1.07
MATN3O15232 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
MATN3O15232 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.72■■□□□ 1.07
MATN3O15232 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MATN3O15232 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.72■■□□□ 1.07
MATN3O15232 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.72■■□□□ 1.07
MATN3O15232 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MATN3O15232 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.72■■□□□ 1.07
MATN3O15232 GUK1-205ENST00000366722 850 ntTSL 3 BASIC21.72■■□□□ 1.07
MATN3O15232 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MATN3O15232 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MATN3O15232 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.72■■□□□ 1.07
MATN3O15232 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
MATN3O15232 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.72■■□□□ 1.07
MATN3O15232 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
MATN3O15232 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MATN3O15232 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.72■■□□□ 1.07
MATN3O15232 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC21.71■■□□□ 1.07
MATN3O15232 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
MATN3O15232 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MATN3O15232 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
MATN3O15232 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MATN3O15232 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MATN3O15232 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.71■■□□□ 1.07
MATN3O15232 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MATN3O15232 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MATN3O15232 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
MATN3O15232 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.71■■□□□ 1.07
MATN3O15232 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.7■■□□□ 1.06
MATN3O15232 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN3O15232 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN3O15232 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN3O15232 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
MATN3O15232 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MATN3O15232 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.7■■□□□ 1.06
MATN3O15232 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN3O15232 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MATN3O15232 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.7■■□□□ 1.06
MATN3O15232 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN3O15232 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.69■■□□□ 1.06
MATN3O15232 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.69■■□□□ 1.06
MATN3O15232 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.69■■□□□ 1.06
MATN3O15232 CPT2-209ENST00000636935 803 ntTSL 5 BASIC21.69■■□□□ 1.06
MATN3O15232 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN3O15232 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN3O15232 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN3O15232 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
MATN3O15232 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MATN3O15232 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MATN3O15232 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
MATN3O15232 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC21.68■■□□□ 1.06
MATN3O15232 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
MATN3O15232 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MATN3O15232 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MATN3O15232 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.3 ms