Protein–RNA interactions for Protein: O14958

CASQ2, Calsequestrin-2, humanhuman

Predicted RBP Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2O14958 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.26■□□□□ 0.83
CASQ2O14958 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CASQ2O14958 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASQ2O14958 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CASQ2O14958 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CASQ2O14958 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CASQ2O14958 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CASQ2O14958 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
CASQ2O14958 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CASQ2O14958 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CASQ2O14958 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CASQ2O14958 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CASQ2O14958 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CASQ2O14958 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASQ2O14958 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASQ2O14958 GABARAPL3-202ENST00000624044 1851 ntBASIC20.24■□□□□ 0.83
CASQ2O14958 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASQ2O14958 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASQ2O14958 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CASQ2O14958 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CASQ2O14958 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.24■□□□□ 0.83
CASQ2O14958 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASQ2O14958 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.24■□□□□ 0.83
CASQ2O14958 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.24■□□□□ 0.83
CASQ2O14958 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CASQ2O14958 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.24■□□□□ 0.83
CASQ2O14958 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CASQ2O14958 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.23■□□□□ 0.83
CASQ2O14958 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASQ2O14958 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
CASQ2O14958 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASQ2O14958 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.23■□□□□ 0.83
CASQ2O14958 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASQ2O14958 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
CASQ2O14958 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CASQ2O14958 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASQ2O14958 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASQ2O14958 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.23■□□□□ 0.83
CASQ2O14958 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.23■□□□□ 0.83
CASQ2O14958 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASQ2O14958 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.23■□□□□ 0.83
CASQ2O14958 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASQ2O14958 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASQ2O14958 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CASQ2O14958 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CASQ2O14958 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASQ2O14958 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASQ2O14958 OXCT2P1-201ENST00000447263 1535 ntBASIC20.22■□□□□ 0.83
CASQ2O14958 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASQ2O14958 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASQ2O14958 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASQ2O14958 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CASQ2O14958 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CASQ2O14958 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CASQ2O14958 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC20.22■□□□□ 0.83
CASQ2O14958 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CASQ2O14958 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.22■□□□□ 0.83
CASQ2O14958 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CASQ2O14958 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.22■□□□□ 0.83
CASQ2O14958 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CASQ2O14958 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC20.21■□□□□ 0.83
CASQ2O14958 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASQ2O14958 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASQ2O14958 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.21■□□□□ 0.83
CASQ2O14958 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.21■□□□□ 0.83
CASQ2O14958 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC20.21■□□□□ 0.83
CASQ2O14958 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASQ2O14958 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CASQ2O14958 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CASQ2O14958 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC20.21■□□□□ 0.83
CASQ2O14958 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.21■□□□□ 0.83
CASQ2O14958 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.83
CASQ2O14958 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASQ2O14958 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASQ2O14958 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASQ2O14958 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.2■□□□□ 0.82
CASQ2O14958 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CASQ2O14958 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC20.2■□□□□ 0.82
CASQ2O14958 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CASQ2O14958 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASQ2O14958 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CASQ2O14958 LINC01529-204ENST00000636474 1715 ntBASIC20.2■□□□□ 0.82
CASQ2O14958 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.2■□□□□ 0.82
CASQ2O14958 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASQ2O14958 AC016575.1-201ENST00000607026 382 ntBASIC20.2■□□□□ 0.82
CASQ2O14958 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.2■□□□□ 0.82
CASQ2O14958 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASQ2O14958 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASQ2O14958 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.2■□□□□ 0.82
CASQ2O14958 HCG11-201ENST00000411553 5696 ntBASIC20.2■□□□□ 0.82
CASQ2O14958 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
CASQ2O14958 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASQ2O14958 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CASQ2O14958 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CASQ2O14958 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CASQ2O14958 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
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