Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK2O00526 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
UPK2O00526 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.11■□□□□ 0.33
UPK2O00526 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.11■□□□□ 0.33
UPK2O00526 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC17.1■□□□□ 0.33
UPK2O00526 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.1■□□□□ 0.33
UPK2O00526 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC17.1■□□□□ 0.33
UPK2O00526 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 SNX3-202ENST00000349379 890 ntTSL 2 BASIC17.1■□□□□ 0.33
UPK2O00526 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
UPK2O00526 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
UPK2O00526 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
UPK2O00526 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK2O00526 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK2O00526 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.09■□□□□ 0.33
UPK2O00526 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK2O00526 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
UPK2O00526 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
UPK2O00526 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.09■□□□□ 0.33
UPK2O00526 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.09■□□□□ 0.33
UPK2O00526 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC17.09■□□□□ 0.33
UPK2O00526 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.08■□□□□ 0.33
UPK2O00526 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
UPK2O00526 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
UPK2O00526 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.08■□□□□ 0.33
UPK2O00526 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK2O00526 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK2O00526 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.08■□□□□ 0.32
UPK2O00526 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.08■□□□□ 0.32
UPK2O00526 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK2O00526 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC17.08■□□□□ 0.32
UPK2O00526 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK2O00526 AF106564.1-201ENST00000607058 2553 ntBASIC17.08■□□□□ 0.32
UPK2O00526 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK2O00526 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
UPK2O00526 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK2O00526 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
UPK2O00526 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK2O00526 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC17.07■□□□□ 0.32
UPK2O00526 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK2O00526 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.07■□□□□ 0.32
UPK2O00526 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK2O00526 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK2O00526 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
UPK2O00526 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK2O00526 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.07■□□□□ 0.32
UPK2O00526 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC17.07■□□□□ 0.32
UPK2O00526 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17.07■□□□□ 0.32
UPK2O00526 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
UPK2O00526 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK2O00526 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK2O00526 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
UPK2O00526 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC17.06■□□□□ 0.32
UPK2O00526 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.06■□□□□ 0.32
UPK2O00526 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC17.06■□□□□ 0.32
UPK2O00526 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC17.06■□□□□ 0.32
UPK2O00526 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.06■□□□□ 0.32
UPK2O00526 AL136116.3-201ENST00000402907 1138 ntBASIC17.06■□□□□ 0.32
UPK2O00526 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.06■□□□□ 0.32
UPK2O00526 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.06■□□□□ 0.32
UPK2O00526 AC003102.1-202ENST00000563394 1796 ntBASIC17.06■□□□□ 0.32
UPK2O00526 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.06■□□□□ 0.32
UPK2O00526 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
UPK2O00526 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.06■□□□□ 0.32
UPK2O00526 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.06■□□□□ 0.32
UPK2O00526 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
UPK2O00526 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC17.05■□□□□ 0.32
UPK2O00526 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC17.05■□□□□ 0.32
UPK2O00526 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK2O00526 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
UPK2O00526 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
UPK2O00526 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC17.05■□□□□ 0.32
UPK2O00526 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.05■□□□□ 0.32
UPK2O00526 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.05■□□□□ 0.32
UPK2O00526 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK2O00526 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK2O00526 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
UPK2O00526 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC17.05■□□□□ 0.32
UPK2O00526 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
UPK2O00526 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms