Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
TLR4O00206 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
TLR4O00206 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR4O00206 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.15■□□□□ 0.98
TLR4O00206 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR4O00206 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR4O00206 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.15■□□□□ 0.98
TLR4O00206 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
TLR4O00206 AC010141.2-201ENST00000452426 721 ntBASIC21.15■□□□□ 0.98
TLR4O00206 AL034346.1-201ENST00000568244 1277 ntBASIC21.15■□□□□ 0.98
TLR4O00206 AC138907.5-202ENST00000569484 235 ntBASIC21.15■□□□□ 0.98
TLR4O00206 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR4O00206 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.15■□□□□ 0.98
TLR4O00206 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
TLR4O00206 C9orf163-202ENST00000624034 2573 ntBASIC21.15■□□□□ 0.98
TLR4O00206 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.15■□□□□ 0.98
TLR4O00206 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
TLR4O00206 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
TLR4O00206 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.14■□□□□ 0.98
TLR4O00206 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
TLR4O00206 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TLR4O00206 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
TLR4O00206 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TLR4O00206 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC21.14■□□□□ 0.97
TLR4O00206 KRT18P20-201ENST00000548986 1279 ntBASIC21.14■□□□□ 0.97
TLR4O00206 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
TLR4O00206 GAMT-205ENST00000640762 751 ntTSL 5 BASIC21.14■□□□□ 0.97
TLR4O00206 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TLR4O00206 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TLR4O00206 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
TLR4O00206 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TLR4O00206 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.14■□□□□ 0.97
TLR4O00206 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
TLR4O00206 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
TLR4O00206 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
TLR4O00206 LINC00526-201ENST00000581067 1875 ntBASIC21.13■□□□□ 0.97
TLR4O00206 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR4O00206 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TLR4O00206 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TLR4O00206 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TLR4O00206 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR4O00206 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.13■□□□□ 0.97
TLR4O00206 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR4O00206 TSPY6P-201ENST00000448518 926 ntBASIC21.13■□□□□ 0.97
TLR4O00206 AC142086.2-201ENST00000569753 217 ntBASIC21.13■□□□□ 0.97
TLR4O00206 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR4O00206 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR4O00206 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR4O00206 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TLR4O00206 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TLR4O00206 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR4O00206 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR4O00206 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
TLR4O00206 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC21.12■□□□□ 0.97
TLR4O00206 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TLR4O00206 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TLR4O00206 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.12■□□□□ 0.97
TLR4O00206 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR4O00206 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
TLR4O00206 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
TLR4O00206 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TLR4O00206 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
TLR4O00206 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
TLR4O00206 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.11■□□□□ 0.97
TLR4O00206 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
TLR4O00206 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.11■□□□□ 0.97
TLR4O00206 SLC7A5P2-201ENST00000553010 536 ntBASIC21.11■□□□□ 0.97
TLR4O00206 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
TLR4O00206 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC21.11■□□□□ 0.97
TLR4O00206 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC21.1■□□□□ 0.97
TLR4O00206 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.1■□□□□ 0.97
TLR4O00206 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC21.1■□□□□ 0.97
TLR4O00206 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR4O00206 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR4O00206 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.1■□□□□ 0.97
TLR4O00206 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC21.1■□□□□ 0.97
TLR4O00206 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
TLR4O00206 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.1■□□□□ 0.97
TLR4O00206 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.1■□□□□ 0.97
TLR4O00206 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR4O00206 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR4O00206 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR4O00206 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
TLR4O00206 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR4O00206 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TLR4O00206 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR4O00206 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC21.09■□□□□ 0.97
TLR4O00206 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR4O00206 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR4O00206 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR4O00206 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR4O00206 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.09■□□□□ 0.97
TLR4O00206 ABHD17AP1-201ENST00000358206 933 ntBASIC21.09■□□□□ 0.97
TLR4O00206 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.09■□□□□ 0.97
TLR4O00206 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.09■□□□□ 0.97
TLR4O00206 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.09■□□□□ 0.97
TLR4O00206 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC21.09■□□□□ 0.97
TLR4O00206 AC010536.3-201ENST00000620306 533 ntBASIC21.09■□□□□ 0.97
TLR4O00206 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TLR4O00206 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms