Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 FXN-202ENST00000396364 980 ntTSL 5 BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
C4orf47A7E2U8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
C4orf47A7E2U8 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 LINC00543-201ENST00000567234 1845 ntBASIC20.94■□□□□ 0.94
C4orf47A7E2U8 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
C4orf47A7E2U8 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 AC004812.2-201ENST00000611079 2094 ntBASIC20.93■□□□□ 0.94
C4orf47A7E2U8 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
C4orf47A7E2U8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 AC091874.3-201ENST00000512672 1195 ntBASIC20.92■□□□□ 0.94
C4orf47A7E2U8 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
C4orf47A7E2U8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 AC008550.1-201ENST00000511500 884 ntBASIC20.91■□□□□ 0.94
C4orf47A7E2U8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
C4orf47A7E2U8 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
C4orf47A7E2U8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms