Protein–RNA interactions for Protein: A6NNY8

USP27X, Ubiquitin carboxyl-terminal hydrolase 27, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP27XA6NNY8 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP27XA6NNY8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC23.05■■□□□ 1.28
USP27XA6NNY8 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP27XA6NNY8 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
USP27XA6NNY8 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP27XA6NNY8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP27XA6NNY8 OXCT2P1-201ENST00000447263 1535 ntBASIC23.05■■□□□ 1.28
USP27XA6NNY8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP27XA6NNY8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC23.05■■□□□ 1.28
USP27XA6NNY8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC23.05■■□□□ 1.28
USP27XA6NNY8 AC104564.3-201ENST00000582367 638 ntBASIC23.05■■□□□ 1.28
USP27XA6NNY8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP27XA6NNY8 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
USP27XA6NNY8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.05■■□□□ 1.28
USP27XA6NNY8 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
USP27XA6NNY8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
USP27XA6NNY8 GABARAPL3-202ENST00000624044 1851 ntBASIC23.05■■□□□ 1.28
USP27XA6NNY8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP27XA6NNY8 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP27XA6NNY8 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP27XA6NNY8 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC23.04■■□□□ 1.28
USP27XA6NNY8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP27XA6NNY8 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC23.04■■□□□ 1.28
USP27XA6NNY8 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
USP27XA6NNY8 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP27XA6NNY8 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP27XA6NNY8 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC23.04■■□□□ 1.28
USP27XA6NNY8 RARRES2P2-201ENST00000394842 485 ntBASIC23.04■■□□□ 1.28
USP27XA6NNY8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC23.04■■□□□ 1.28
USP27XA6NNY8 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
USP27XA6NNY8 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC23.04■■□□□ 1.28
USP27XA6NNY8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
USP27XA6NNY8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC23.04■■□□□ 1.28
USP27XA6NNY8 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC23.03■■□□□ 1.28
USP27XA6NNY8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP27XA6NNY8 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP27XA6NNY8 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP27XA6NNY8 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP27XA6NNY8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.03■■□□□ 1.28
USP27XA6NNY8 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP27XA6NNY8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC23.03■■□□□ 1.28
USP27XA6NNY8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC23.03■■□□□ 1.28
USP27XA6NNY8 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC23.03■■□□□ 1.28
USP27XA6NNY8 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP27XA6NNY8 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP27XA6NNY8 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
USP27XA6NNY8 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
USP27XA6NNY8 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP27XA6NNY8 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP27XA6NNY8 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP27XA6NNY8 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP27XA6NNY8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC23.02■■□□□ 1.28
USP27XA6NNY8 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC23.02■■□□□ 1.28
USP27XA6NNY8 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC23.02■■□□□ 1.28
USP27XA6NNY8 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
USP27XA6NNY8 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
USP27XA6NNY8 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC23.02■■□□□ 1.28
USP27XA6NNY8 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP27XA6NNY8 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP27XA6NNY8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC23.01■■□□□ 1.27
USP27XA6NNY8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
USP27XA6NNY8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC23.01■■□□□ 1.27
USP27XA6NNY8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP27XA6NNY8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP27XA6NNY8 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
USP27XA6NNY8 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP27XA6NNY8 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC23.01■■□□□ 1.27
USP27XA6NNY8 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP27XA6NNY8 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
USP27XA6NNY8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC23.01■■□□□ 1.27
USP27XA6NNY8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP27XA6NNY8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC23■■□□□ 1.27
USP27XA6NNY8 BHLHE23-202ENST00000612929 1109 ntBASIC23■■□□□ 1.27
USP27XA6NNY8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
USP27XA6NNY8 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP27XA6NNY8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP27XA6NNY8 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP27XA6NNY8 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC23■■□□□ 1.27
USP27XA6NNY8 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC23■■□□□ 1.27
USP27XA6NNY8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
USP27XA6NNY8 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
USP27XA6NNY8 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP27XA6NNY8 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.99■■□□□ 1.27
USP27XA6NNY8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
USP27XA6NNY8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.99■■□□□ 1.27
USP27XA6NNY8 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC22.99■■□□□ 1.27
USP27XA6NNY8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC22.99■■□□□ 1.27
USP27XA6NNY8 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC22.99■■□□□ 1.27
USP27XA6NNY8 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP27XA6NNY8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
USP27XA6NNY8 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.98■■□□□ 1.27
USP27XA6NNY8 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.98■■□□□ 1.27
USP27XA6NNY8 AC009102.2-201ENST00000606772 1639 ntBASIC22.98■■□□□ 1.27
USP27XA6NNY8 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC22.98■■□□□ 1.27
USP27XA6NNY8 AC010980.1-201ENST00000587192 1142 ntBASIC22.98■■□□□ 1.27
USP27XA6NNY8 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC22.98■■□□□ 1.27
USP27XA6NNY8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
USP27XA6NNY8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
USP27XA6NNY8 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
USP27XA6NNY8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms