Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 Z98882.1-201ENST00000622160 2253 ntBASIC17.05■□□□□ 0.32
CGB1A6NKQ9 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CGB1A6NKQ9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 PTMA-205ENST00000410064 814 ntTSL 2 BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CGB1A6NKQ9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CGB1A6NKQ9 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGB1A6NKQ9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGB1A6NKQ9 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC17.02■□□□□ 0.32
CGB1A6NKQ9 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CGB1A6NKQ9 AC005229.4-201ENST00000610085 2198 ntBASIC17.02■□□□□ 0.32
CGB1A6NKQ9 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
CGB1A6NKQ9 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.02■□□□□ 0.32
CGB1A6NKQ9 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CGB1A6NKQ9 UNC93B3-201ENST00000308076 687 ntBASIC17.02■□□□□ 0.32
CGB1A6NKQ9 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
CGB1A6NKQ9 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC17.02■□□□□ 0.32
CGB1A6NKQ9 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CGB1A6NKQ9 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CGB1A6NKQ9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CGB1A6NKQ9 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.02■□□□□ 0.31
CGB1A6NKQ9 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC17.02■□□□□ 0.31
CGB1A6NKQ9 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CGB1A6NKQ9 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CGB1A6NKQ9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CGB1A6NKQ9 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 MIR4767-201ENST00000582827 78 ntBASIC17.01■□□□□ 0.31
CGB1A6NKQ9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 AC131212.1-201ENST00000613771 668 ntBASIC17.01■□□□□ 0.31
CGB1A6NKQ9 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CGB1A6NKQ9 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
CGB1A6NKQ9 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17■□□□□ 0.31
CGB1A6NKQ9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC17■□□□□ 0.31
CGB1A6NKQ9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17■□□□□ 0.31
CGB1A6NKQ9 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC17■□□□□ 0.31
CGB1A6NKQ9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17■□□□□ 0.31
CGB1A6NKQ9 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17■□□□□ 0.31
CGB1A6NKQ9 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.99■□□□□ 0.31
CGB1A6NKQ9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CGB1A6NKQ9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC16.99■□□□□ 0.31
CGB1A6NKQ9 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC16.99■□□□□ 0.31
CGB1A6NKQ9 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC16.99■□□□□ 0.31
CGB1A6NKQ9 BX842568.3-201ENST00000418104 571 ntBASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms