Protein–RNA interactions for Protein: A1L4H1

SSC5D, Soluble scavenger receptor cysteine-rich domain-containing protein SSC5D, humanhuman

Predictions only

Length 1,573 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC5DA1L4H1 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SSC5DA1L4H1 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SSC5DA1L4H1 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC25.19■■□□□ 1.62
SSC5DA1L4H1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC25.19■■□□□ 1.62
SSC5DA1L4H1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC25.19■■□□□ 1.62
SSC5DA1L4H1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC25.19■■□□□ 1.62
SSC5DA1L4H1 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
SSC5DA1L4H1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC25.18■■□□□ 1.62
SSC5DA1L4H1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC25.18■■□□□ 1.62
SSC5DA1L4H1 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.18■■□□□ 1.62
SSC5DA1L4H1 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
SSC5DA1L4H1 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC25.18■■□□□ 1.62
SSC5DA1L4H1 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
SSC5DA1L4H1 ESRRAP1-201ENST00000400596 1257 ntBASIC25.18■■□□□ 1.62
SSC5DA1L4H1 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC25.18■■□□□ 1.62
SSC5DA1L4H1 AC091874.3-201ENST00000512672 1195 ntBASIC25.18■■□□□ 1.62
SSC5DA1L4H1 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC25.18■■□□□ 1.62
SSC5DA1L4H1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC25.17■■□□□ 1.62
SSC5DA1L4H1 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
SSC5DA1L4H1 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
SSC5DA1L4H1 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC25.16■■□□□ 1.62
SSC5DA1L4H1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC25.16■■□□□ 1.62
SSC5DA1L4H1 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC25.16■■□□□ 1.62
SSC5DA1L4H1 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
SSC5DA1L4H1 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
SSC5DA1L4H1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 BET1L-207ENST00000529614 560 ntTSL 5 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC25.15■■□□□ 1.62
SSC5DA1L4H1 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 AC008694.1-202ENST00000636953 945 ntBASIC25.14■■□□□ 1.62
SSC5DA1L4H1 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
SSC5DA1L4H1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC25.14■■□□□ 1.61
SSC5DA1L4H1 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
SSC5DA1L4H1 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SSC5DA1L4H1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC25.14■■□□□ 1.61
SSC5DA1L4H1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SSC5DA1L4H1 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC25.14■■□□□ 1.61
SSC5DA1L4H1 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
SSC5DA1L4H1 AC010980.2-201ENST00000587099 1412 ntBASIC25.13■■□□□ 1.61
SSC5DA1L4H1 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC25.13■■□□□ 1.61
SSC5DA1L4H1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
SSC5DA1L4H1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SSC5DA1L4H1 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SSC5DA1L4H1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
SSC5DA1L4H1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC25.13■■□□□ 1.61
SSC5DA1L4H1 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC25.13■■□□□ 1.61
SSC5DA1L4H1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC25.13■■□□□ 1.61
SSC5DA1L4H1 RBM17P2-201ENST00000616397 1405 ntBASIC25.13■■□□□ 1.61
SSC5DA1L4H1 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 AL596275.1-201ENST00000423464 877 ntBASIC25.12■■□□□ 1.61
SSC5DA1L4H1 AC006058.3-201ENST00000606217 1069 ntBASIC25.12■■□□□ 1.61
SSC5DA1L4H1 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC25.12■■□□□ 1.61
SSC5DA1L4H1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms